Regular Article
Promoter Analysis and Chromosomal Mapping of Human EBAG9 Gene

https://doi.org/10.1006/bbrc.2000.2920Get rights and content

Abstract

The human EBAG9 was previously identified as an estrogen responsive gene using CpG-genomic binding site cloning (Watanate et al., (1998) Mol. Cell. Biol. 18: 442–449). Recently it was revealed that the EBAG9 is identical with RCAS1 which is a cancer cell surface antigen implicated in immune escape. Here, we isolated and analyzed the 5′-flanking region of human EBAG9 gene. We determined transcription initiation site, which has a homology with an initiator element YYCAYYYY, and found that TATA motif was absent. Deletion analysis of the 5′-flanking region using MCF-7 breast cancer cells indicated that the sequences −86 to −36 containing the ERE had the basal level of promoter activity and the upstream GC-rich region positively regulated the activity. EBAG9 promoter luciferase reporters containing the ERE could respond to estrogen, and electrophoretic mobility shift assay showed that ERα bound to the ERE. Moreover, fluorescent in situ hybridization analysis has shown that the human EBAG9 gene is located at chromosome 8q23 which is frequently amplified in tumors. These findings suggest that the human EBAG9 might be involved in carcinogenesis as an estrogen responsive gene.

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      These findings suggest that EBAG9 functions as an estrogen-responsive gene in ER-positive breast cancer cells. However, promoter analysis demonstrated that the 5′-flanking region of the EBAG9 gene contains several transcription factor-binding sites in addition to a prototypic consensus estrogen-responsive element,20 suggesting that other transcriptional regulatory pathways also regulate EBAG9 expression in breast cancer cells. High-level EBAG9 expression mediated by factors other than ER might result in an unfavorable prognosis in breast cancer patients after tamoxifen treatment.

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    • Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1

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      In addition, a number of recent strategies including gene expression profiling on microarrays have identified potential ER target genes in human breast cancer cells and only a few cis-elements targeted directly by ER have been identified to date. For example, estrogen responsive elements (ERE) have been identified within the 1 kb 5′-proximal region of the estrogen-regulated genes TFF-1 (pS2), EBAG9, and Cathepsin D (Augereau et al., 1994; Berry et al., 1989; Ikeda et al., 2000), and the proximal promoters of target genes that lack EREs, including c-Myc and IGF-I, contain AP-1 and Sp-1 sites that appear essential for transcription in in vitro reporter assays (Dubik and Shiu, 1992; Umayahara et al., 1994). Few, if any regulatory elements at significant distances from the mRNA start sites of target genes have been shown to be directly targeted by ER, and computation approaches to identify novel ER binding domains have focused primarily on gene proximal regions (Bajic and Seah, 2003; Bourdeau et al., 2004).

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    To whom correspondence should be addressed at Department of Biochemistry, Saitama Medical School, 38 Morohongo, Moroyama, Iruma, Saitama 350-0495, Japan. Fax: 81-492-94-9751.

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