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Genetic linkage mapping in peach using morphological, RFLP and RAPD markers

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Abstract

We have constructed a genetic linkage map of peach [Prunus persica (L.) Batsch] consisting of RFLP, RAPD and morphological markers, based on 71 F2 individuals derived from the self-fertilization of four F1 individuals of a cross between ‘New Jersey Pillar’ and KV 77119. This progeny, designated as the West Virginia (WV) family, segregates for genes controlling canopy shape, fruit flesh color, and flower petal color, size and number. The segregation of 65 markers, comprising 46 RFLP loci, 12 RAPD loci and seven morphological loci, was analyzed. Low-copy genomic and cDNA probes were used in the RFLP analysis. The current genetic map for the WV family contains 47 markers assigned to eight linkage groups covering 332 centi Morgans (cM) of the peach nuclear genome. The average distance between two adjacent markers is 8 cM. Linkage was detected between Pillar (Pi) and double flowers (Dl) RFLP markers linked to Pi and flesh color (γ) loci were also found. Eighteen markers remain unassigned. The individuals analyzed for linkage were not a random sample of all F2 trees, as an excess of pillar trees were chosen for analysis. Because of this, Pi and eight other markers that deviated significantly from the expected Mendelian ratios (e.g., 1∶2∶1 or 3∶1) were not eliminated from the linkage analysis. Genomic clones that detect RFLPs in the WV family also detect significant levels of polymorphism among the 34 peach cultivars examined. Unique fingerprint patterns were created for all the cultivars using only six clones detecting nine RFLP fragments. This suggests that RFLP markers from the WV family have a high probability of being polymorphic in crosses generated with other peach cultivars, making them ideal for anchor loci. This possibility was examined by testing RFLP markers developed with the WV family in three other unrelated peach families. In each of these three peach families respectively 43%, 54% and 36% of RFLP loci detected in the WV family were also polymorphic. This finding supports the possibility that these RFLP markers may serve as anchor loci in many other peach crosses.

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References

  • Arumuganathan, K, Earle ED (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9:208–218.

    CAS  Google Scholar 

  • Bailey JS, French AP (1942) The inheritance of blossom type and blossom size in peach. Proc Am Soc Hort Sci 40:248–250

    Google Scholar 

  • Baird V, Estager AS, Wells JK (1994) Estimation of nulear DNA content in peach and related diploid species using laser flow cytometry and DNA hybridization. J Amer Soc Hort Sci 119:1312–1316

    Google Scholar 

  • Chaparro JX, Werner DJ, O'Malley D, Sederoff RR (1994) Targeted mapping and linkage analysis of morphological, isozyme, and RAPD markers in peach. Theor Appl Genet 87:805–815

    CAS  Google Scholar 

  • Coe EH, Hoisington DA, Neuffer MG (1990) Linkage map of corn (maize) (Zea mays L.) (2n=20). In: O'Brien SJ (ed) Genetic maps. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, pp 639–667

    Google Scholar 

  • Connors CH (1920a) Some notes on the inheritance of fruit characters in the peach. Proc Am Soc Hort Sci 16:24–36

    Google Scholar 

  • Connors CH (1920b) Peach breeding. A summary of results. Proc Am Soc Hort Sci 19:108–115

    Google Scholar 

  • Eldredge, L, Ballard, R, Baird WV, Abbott A, Morgens P, Callahan A, Scorza R, Monet R (1992) Application of RFLP analysis to genetic linkage mapping in peaches. Hort Sci 27:160–163

    Google Scholar 

  • Feinberg A, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Bioch 132:6–13

    CAS  PubMed  Google Scholar 

  • Hunt GJ, Page RE (1992) Patterns of inheritance with RAPD molecular markers reveal novel types of polymorphism in the honey bee. Theor Appl Genet 85:15–20

    Google Scholar 

  • Keim P, Diers B, Olson T, Shoemaker RC (1990) RFLP mapping in soybean: association between marker loci and variation in quantitative traits. Genetics 126:735–742

    Google Scholar 

  • Lammerts WE (1945) The breeding of ornamental edible peaches for mild climates. I. Inheritance of tree and flower characters. Am J Bot 32:53–61

    Google Scholar 

  • Lincoln S, Daly M, Lander E (1992) Constructing genetic maps with MAPMAKER/EXP 3.0 Whitehead Institute Technical Report, 3rd edn.

  • Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York

    Google Scholar 

  • McCouch SR, Kochert G, Yu ZH, Wang Z, Khush GS, Coffman W, Tanksley SD (1988) Molecular mapping of rice chromosomes. Theor Appl Genet 76:815–829

    CAS  Google Scholar 

  • Meagher RB, McLean M, Arnold J (1988) Recombination within a subclass of restriction fragment length polymorphisms may help link classical and molecular genetics. Genetics 120:809–818

    Google Scholar 

  • Mehlenbacher SA, Scorza R (1986) Inheritance of growth habit in progenies of ‘Compact Redhaven’ trees. Hort Science 21:124–126

    Google Scholar 

  • Messeguer R, Viruel MA, de Vicente M C, Garcia-Mas J, Fernandez-Busquets X, Vargas F, Puigdomenech P, Arus P (1994) Construction of a genetic map with molecular markers in almond. Plant Genome II: 2nd Int Conf Plant Genome, January 24–27, San Diego, California, Conference Program and Abstracts Guide, p 51

  • Monet R (1989) Peach genetics: past, present and future. Acta Hort 254:49–57

    Google Scholar 

  • Monet R, Bastard Y, Gibault B (1985) Etude genetique et amelioration des pechs plates. Agronomie 5:727–731

    Google Scholar 

  • Mowrey BD, Werner DJ, Byrne DH (1990) Inheritance of isocitrate dehydrogenase, malate dehydrogenase, and shikimate dehydrogenase in peach and peach x almond hybrids. J Am Soc Hort Sci 115:312–319

    Google Scholar 

  • Nodari RO, Tsai SM, Gilbertson RL, Gepts P (1993) Towards an integrated linkage map of common bean. 2. Development of an RFLP-based linkage map. Theor Appl Genet 85:513–520

    Google Scholar 

  • Paterson AH, Lander ES, Hewitt JD, Peterson S, Lincoln SE, Tanksley SD (1988) Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms. Nature 335:721–726

    Article  CAS  PubMed  Google Scholar 

  • Reiter R, Williams J, Feldman K, Rafalski A, Tingey S, Scolnik P (1992) Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs. Proc Natl Acad Sci USA 89:1477–1481

    Google Scholar 

  • Riedy MF, Hamilton WJ, Aquardo C (1992) Excess of non-parental bands in offspring from known primate pedigrees assayed using RAPD PCR. Nucleic Acids Research 20:918

    Google Scholar 

  • Schery RW (1972) Plants for man. Prentice-Hall, Inc., Englewood, New Jersey, USA

    Google Scholar 

  • Scorza R, Lightner GW, Liverani A (1989) The pillar peach tree and growth habit analysis of compact x pillar progeny. J Am Soc Hort Sci 114:991–995

    Google Scholar 

  • Sherman WB, Lyrene PM (1983) Handling seedling populations. In: Moore, JN, Janick J (eds) Advances in fruit breeding. Purdue University Press, West Lafayette, USA, pp 66–73

    Google Scholar 

  • Weinberger JH (1994) Characteristics of the progeny of certain peach varieties. Proc Am Soc Hort Sci 45:233–238

    Google Scholar 

  • Yamazaki K, Okabe M, Takahashi E (1987) Inheritance of some characteristics and breeding of new hybrids in flowering peaches. Bull Kanagawa Hort Exp Sta 34:46–53

    Google Scholar 

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Communicated by G. E. Hart

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Rajapakse, S., Belthoff, L.E., He, G. et al. Genetic linkage mapping in peach using morphological, RFLP and RAPD markers. Theoret. Appl. Genetics 90, 503–510 (1995). https://doi.org/10.1007/BF00221996

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  • DOI: https://doi.org/10.1007/BF00221996

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