Skip to main content
Log in

A non-radioactive in situ hybridization method for the localization of specific RNAs in Drosophila embryos reveals translational control of the segmentation gene hunchback

  • Published:
Chromosoma Aims and scope Submit manuscript

Abstract

We have developed a non-radioactive in situ hybridization technique for the localization of RNA in whole mount Drosophila embryos. After fixation, whole embryos are hybridized in situ with a DNA probe which has been labeled with digoxygenin. The hybridization products are detected by using a phosphatase-coupled antibody against digoxygenin. In parallel experiments, embryos can be treated with an antibody directed against the corresponding protein product to allow the detection of its distribution using standard immunochemical techniques. We have used this approach to compare the spatial and temporal distribution patterns of the RNA and protein products of the segmentation gene hunchback (hb) during the early stages of embryogenesis. This comparison revealed translational control of the maternally derived hb mRNA, which was difficult to detect by conventional techniques. The non-radioactive in situ hybridization method is as sensitive as conventional methods, but is faster and easier to perform. This may make it a useful tool for a variety of other systems.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Akam ME (1983) The location of Ultrabithorax transcripts in Drosophila tissue sections. EMBO J 2:2075–2084

    Google Scholar 

  • Akam ME (1987) The molecular basis for metameric pattern in the Drosophila embryo. Development 101:1–22

    Google Scholar 

  • Bender M, Horikami S, Cribbs D, Kaufman TC (1988) Identification and expression of the gap segmentation gene hunchback in Drosophila melanogaster. Dev Genet 9:715–732

    Google Scholar 

  • Driever W, Nüsslein-Volhard C (1988) A gradient of bicoid protein in Drosophila embryos. Cell 54:83–93

    Google Scholar 

  • Driever W, Nüsslein-Volhard C (1989) The bicoid protein is a positive regulator of hunchback transcription in the early Drosophila embryo. Nature 337:138–143

    Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    Google Scholar 

  • Foe VE, Alberts BM (1983) Studies of nuclear and cytoplasmic behavior during the five mitotic cycles that precede gastrulation in Drosophila embryogenesis. J Cell Sci 61:31–70

    Google Scholar 

  • Frohnhöfer HG, Nüsslein-Volhard C (1986) Organization of anterior pattern in the Drosophila embryo by the maternal gene bicoid. Nature 324:120–125

    Google Scholar 

  • Hafen E, Levine M, Garber RL, Gehring WJ (1983) An improved in situ hybridization method for the detection of cellular RNAs in Drosophila tissue sections and its application for localizing transcripts of the homoeotic Antennapedia gene complex. EMBO J 12:617–623

    Google Scholar 

  • Hülskamp M, Schröder C, Pfeifle C, Jäckle H, Tautz D (1989) Posterior segmentation of the Drosophila embryo in the absence of a maternal posterior organizer gene. Nature 338:629–632

    Google Scholar 

  • Ingham PW (1988) The molecular genetics of embryonic pattern formation in Drosophila. Nature 335:25–34

    Google Scholar 

  • Kuroiwa A, Hafen E, Gehring WJ (1984) Cloning and transcriptional analysis of the segmentation gene fushi tarazu of Drosophila. Cell 37:825–831

    Google Scholar 

  • Lawrence PA, Johnston P, Morata G (1986) Methods of marking cells. In: Roberts DB (ed) Drosophila, a practical approach, IRL Press, Oxford, pp 229–242

    Google Scholar 

  • Lehmann R, Nüsslein-Volhard C (1984) Hunchback, a gene required for segmentation of an anterior and posterior region of the embryo. Dev Biol 119:402–417

    Google Scholar 

  • Macdonald PM, Struhl G (1986) A molecular gradient in early Drosophila embryos and its role in specifying the body pattern. Nature 324:537–545

    Google Scholar 

  • Nauber U, Pankratz M, Kienlin A, Seifert E, Klemm U, Jäckle H (1988) Abdominal segmentation of the Drosophila embryo requires a hormone receptor like protein encoded by the gap gene knirps. Nature 336:489–492

    Google Scholar 

  • Nüsslein-Volhard C, Wieschaus E (1980) Mutations affecting segment number and polarity in Drosophila. Nature 287:795–801

    Google Scholar 

  • Nüsslein-Vollhard C, Frohnhöfer HG, Lehmann R (1987) Determination of Anteroposterior polarity in Drosophila. Science 238:1675–1681

    Google Scholar 

  • Preiss A, Rosenberg UB, Kienlin A, Seifert E, Jäckle H (1985) Molecular genetics of Krüppel, a gene required for segmentation of the Drosophila embryo. Nature 313:27–32

    Google Scholar 

  • Schröder C, Tautz D, Seifert E, Jäckle H (1988) Differential regulation of the two transcripts from the Drosophila gap segmentation gene hunchback. EMBO J 7:2881–2887

    Google Scholar 

  • Tautz D (1988) Regulation of the Drosophila segmentation gene hunchback by two maternal morphogenetic centres. Nature 332:281–284

    Google Scholar 

  • Tautz D, Renz M (1983) An optimized freeze-squeeze method for the recovery of DNA fragments from agarose gels. Anal Biochem 132:14–19

    Google Scholar 

  • Tautz D, Lehmann R, Schnürch H, Schuh R, Seifert E, Kienlin A, Jones K, Jäckle H (1987) Fingerprotein of novel structure encoded by hunchback, a second member of the gap class of Drosophila segmentation genes. Nature 327:383–389

    Google Scholar 

  • Weiner AJ, Scott MP, Kaufmann TC (1984) A molecular analysis of fushi tarazu, a gene in Drosophila melanogaster that encodes a product affecting embryonic segment number and cell fate. Cell 37:843–851

    Google Scholar 

  • Wieschaus E, Nüsslein-Volhard C (1986) Looking at embryos. In: Roberts DB (ed) Drosophila, a practical approach. IRL Press, Oxford, pp 199–228

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tautz, D., Pfeifle, C. A non-radioactive in situ hybridization method for the localization of specific RNAs in Drosophila embryos reveals translational control of the segmentation gene hunchback . Chromosoma 98, 81–85 (1989). https://doi.org/10.1007/BF00291041

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00291041

Keywords

Navigation