Skip to main content
Log in

The PiGMaP consortium linkage map of the pig (Sus scrofa)

  • Special Reports
  • Published:
Mammalian Genome Aims and scope Submit manuscript

Abstract

A linkage map of the porcine genome has been developed by segregation analysis of 239 genetic markers. Eighty-one of these markers correspond to known genes. Linkage groups have been assigned to all 18 autosomes plus the X Chromosome (Chr). As 69 of the markers on the linkage map have also been mapped physically (by others), there is significant integration of linkage and physical map data. Six informative markers failed to show linkage to these maps. As in other species, the genetic map of the heterogametic sex (male) was significantly shorter (∼16.5 Morgans) than the genetic map of the homogametic sex (female) (∼21.5 Morgans). The sex-averaged genetic map of the pig was estimated to be ∼18 Morgans in length. Mapping information for 61 Type I loci (genes) enhances the contribution of the pig gene map to comparative gene mapping. Because the linkage map incorporates both highly polymorphic Type II loci, predominantly microsatellites, and Type I loci, it will be useful both for large experiments to map quantitative trait loci and for the subsequent isolation of trait genes following a comparative and candidate gene approach.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Anderson Dear, D.V., Miller, J.R. (1994). Isolation of dinucleotide repeats from a pig chromosome 1-specific DNA library. Mamm. Genome 5, 649–651.

    Google Scholar 

  • Andersson, L., Haley, C.S., Ellegren, H., Knott, S.A., Johansson, M., Andersson K., Andersson-Eklund, L., Edfors-Lilja, I., Fredholm, M., Hansson, I., Håkansson, J., Lundström, K. (1994). Genetic mapping of quantitative trait loci for growth and fatness in pigs. Science 263, 1771–1774.

    Google Scholar 

  • Andresen, E. (1962). Blood groups in pigs. Ann. N. Y. Acad. Sci. 97, 205–255.

    Google Scholar 

  • Archibald, A.L., Couperwhite, S., Haley, C.S., Beattie, C.W., Alexander, L.J. (1994a). RFLP and linkage analysis of the porcine casein loci—CASAS1, CASAS2, CASB and CASK. Anim. Genet. 25, 349–351.

    Google Scholar 

  • Archibald, A.L., Couperwhite, S., Mellink, C.H.M., Lahbib-Mansais, Y., Gellin, J. (1994b). Porcine alpha-1-antitrypsin: cDNA cloning and gene mapping. Anim. Genet., submitted.

  • Archibald, A.L., Couperwhite, S., Rettenberger, G., Hameister, H. (1994c). Mapping anchored reference loci in the pig, in preparation.

  • Bigi, D., Davoli, R., Dall'Olio, S., Russo, V., (1994). A PvuII polymorphism at the porcine aminopeptidase N (PEPN) locus. Anim. Genet. 25, 65.

    Google Scholar 

  • Brown, J.F., Archibald, A.L. (1993). A porcine polymorphic microsatellite (S0031). Anim. Genet. 24, 71.

    Google Scholar 

  • Brown, J.F., Archibald, A.L. (1995). Two porcine polymorphic microsatellite loci (S0033 & S0035). Anim. Genet. 26, in press.

  • Brown, J.F., Hardge, T., Rettenberger, G., Archibald, A.L. (1994). Four new porcine polymorphic microsatellite loci (S0032, S0034, S0036 & S0037). Anim. Genet. 25, 365.

    Google Scholar 

  • Brown, J.F., Hardge, T., Archibald, A.L. (1995). A porcine polymorphic locus (S0040) revealed with primers for a mouse microsatellite. Anim. Genet. 26, in press.

  • Chowdhary, B.P., Johansson, M., Chaudhary, R., Ellegren, H., Gu, F., Andersson, L., Gustavsson, L. (1993a). In situ hybridization mapping and restriction fragment length polymorphism analysis of the porcine albumin (ALB) and transferrin (TF) genes. Anim. Genet. 24, 85–90.

    Google Scholar 

  • Chowdhary, B.P., Johansson, M., Gu, F., Bräuner-Nielsen, P., Tomkinson, B., Andersson, L., Gustavsson, I. (1993b). Assignment of the linkage group EAM-TRYP2-TPP2 to chromosome 11 in pigs by in situ hybridization of the TPP2 gene. Chromosome Res. 1, 175–179.

    Google Scholar 

  • Chowdhary, B.P., Ellegren, H., Johansson, M., Andersson, L., Gustavsson, I. (1994). In situ hybridization mapping of the growth hormone receptor (GHR) gene assigns a linkage group (C9, FSA, GHR and S0105) to Chromosome 16 in pigs. Mamm. Genome 5, 160–162.

    Google Scholar 

  • Collins, F.S. (1992). Positional cloning: Let's not call it reverse anymore. Nature Genet. 1, 3–6.

    Google Scholar 

  • Committee for the Standardized Karyotype of the Domestic Pig. (1988). Standard karyotype of the domestic pig. Hereditas 109, 151–157.

    Google Scholar 

  • Coppieters, W., Van de Weghe, A., Depicker, A., Bouquet, Y., Van Zeveren, A., (1990). A hypervariable pig DNA fragment. Anim. Genet. 21, 29–38.

    Google Scholar 

  • Coppieters, W., Van de Weghe, A., Peelman, L., Depicker, A., Van Zeveren, A., Bouquet, Y. (1993). Characterization of porcine polymorphic microsatellite loci. Anim. Genet. 24, 163–170.

    Google Scholar 

  • Coppieters, W., Zijlstra, C., Van de Weghe, A., Bosma, A.A., Peelman, L., Van Zeveren, A., Bouquet, Y. (1994). A porcine minisatellite located on Chromosome 14q29. Mamm. Genome 5, 591–593.

    Google Scholar 

  • Coppieters, W., Van de Weghe, A., Depicker, A., Peelman, L., Van Zeveren, A., Bouquet, Y. (1995). Polymorphic CAC/CAT repetitive sequences in the pig genome. Anim. Genet. 26, in press.

  • Coscelli, M.B., Davoli, R., Farnetti, E., Russo, V. (1994). BglII RFLP at the porcine arachidonate 12-lipoxygenase (LOG12) locus. Anim. Genet. 25, 57.

    Google Scholar 

  • Couperwhite, S., Archibald, A.L. (1993a). An EcoRV RFLP at the porcine chromogranin A locus (CHGA). Anim. Genet. 24, 331.

    Google Scholar 

  • Couperwhite, S., Archibald, A.L. (1993b). An XbaI RFLP at the porcine growth hormone receptor locus (GHR). Anim. Genet. 24, 331.

    Google Scholar 

  • Couperwhite, S., Archibald, A.L. (1994). An EcoRI RFLP at the porcine endothelin-1 locus (EDN1). Anim. Genet. 25, 286.

    Google Scholar 

  • Couperwhite, S., Archibald, A.L. (1995). A RFLP at the porcine locus encoding brain natriuretic peptide 1 (BNP1). Anim. Genet., in press.

  • Couperwhite, S., Hemmings, B.A., Archibald, A.L., (1992a). A BamHI RFLP at the locus encoding the 65-kDa regulatory subunit of porcine protein phosphatase 2A (PPP2ARB). Anim. Genet. 23, 568.

    Google Scholar 

  • Couperwhite, S., Kato, Y., Archibald, A.L. (1992b). A TaqI RFLP at the porcine thyroid stimulating hormone β-subunit locus (TSHB). Anim. Genet. 23, 567.

    Google Scholar 

  • Couperwhite, S., Buchman, T.G., Archibald, A.L. (1995a). A HindIII RFLP at the inter-α-trypsin inhibitor locus (ITIH). Anim. Genet. 26, in press.

  • Couperwhite, S., Hemmings, B.A., Archibald, A.L. (1995b). RFLPs at the porcine locus encoding the type I alpha regulatory subunit of the cAMP-dependent protein kinase (PRKAR1A). Anim. Genet. 26, in press.

  • Couperwhite, S., Stone, R.T., Archibald, A.L. (1994c). A PstI RFLP at the porcine orosomucoid locus (ORM). Anim. Genet. 25, 285.

    Google Scholar 

  • Davies, W., Harbitz, I., Fries, R., Stranzinger, G., Hauge, J. (1988). Porcine malignant hyperthermia detection and chromosomal assignment using a linked probe. Anim. Genet. 19, 203–212.

    Google Scholar 

  • Davics, W., Kran, S., Kristensen, T., Harbitz, I. (1992a). Characterization of a porcine variable number tandem repeat sequence specific for the glucosephosphate isomerase locus. Anim. Genet. 23, 437–441.

    Google Scholar 

  • Davies, W., Høyheim, B., Chaput, B., Frelat, G., Keiserud, A. (1992b). Rapid isolation of porcine chromosome 13-specific microsatellites. Anim. Genet. 23, Suppl. 1, 90.

    Google Scholar 

  • Davies, W., Høyheim, B., Archibald, A.L., Frélat, G., Chaput, B. (1994). Characterization of microsatellites from flow sorted porcine Chromosome 13. Mamm. Genome 5, 707–711.

    Google Scholar 

  • Davoli, R., Zambonelli, P., Bigi, D., Farnetti, E., Russo, V. (1994). A HincII polymorphism at the porcine γ-glutamyl transpeptidase (GGT) locus. Anim. Genet. 25, 57.

    Google Scholar 

  • Dietrich, W.F., Miller, J.C., Steen, R.G., Merchant, M., Damron, D., Nahf, R., Gross, A., Joyce, D.C., Wessel, M., Dredge, R.D., Marquis, A., Stein, L.D., Goodman, N., Page, D.C., Lander, E.S. (1994). A genetic map of the mouse with 4,006 simple sequence length polymorphisms. Nature Genet. 7, 220–245.

    Google Scholar 

  • Donis-Keller, H., Green, P., Helms, C., Cartinhour, S., Weiffenbach, B., Stephens, K., Keith, T.P., Bowden, D.W., Smith, D.R., Lander, E.S., Botstein, D., Akots, G., Rediker, K.S., Gravius, T., Brown, V.A., Rising, M.B. Parker, C., Powers, J.A., Watt, D.E., Kauffman, E.R., Bricker, A., Phipps, P., Muller-Kahle, H., Fulton, T.R., Ng., S., Schumm, J.W., Braman, J.C., Knowlton, R.G., Barker, D.F., Crooks, S.M., Lincoln, S.E., Daly, M.J., Abrahamson, J. (1987). A genetic linkage map of the human genome. Cell 51, 319–337.

    Google Scholar 

  • Echard, G., Yerle, M., Gellin, J., Dalens, M., Gillois, M. (1986). Assignment of the major histocompatibility complex to the p14-q12 region of chromosome 7 in pig (Sus scrofa domestica L.) by in situ hybridization. Cytogenet. Cell Genet. 41, 126–128.

    Google Scholar 

  • Edfors-Lilja, I., Ellegren, H., Winterø, A.K., Ruohonen-Lehto, M., Fredholm, M., Gustafsson, U., Juneja, R.K., Andersson, L. (1993). A large linkage group on pig chromosome 7 including the MHC class I, class II (DQB), and class III (TNFB) genes. Immunogenetic 38, 363–366.

    Google Scholar 

  • Ellegren, H. (1993a). Abundant (A)n. (T)n mononucleotide repeats in the pig genome: linkage mapping of the porcine APOB, FSA, ALOX12, PEPN and RLN loci. Anim. Genet. 24, 367–372.

    Google Scholar 

  • Ellegren, H. (1993b). Variable SINE 3′ poly(A) sequences: an abundant class of genetic markers in the pig genome. Mamm. Genome 4, 429–434.

    Google Scholar 

  • Ellegren, H. (1994). Linkage mapping of the apolipoprotein A-I (APOA1) gene to pig Chromosome 9. Mamm. Genome 5, 58–59.

    Google Scholar 

  • Ellegren, H., Fredholm, M., Edfors-Lilja, I., Winterø, A.K., Andersson, L. (1993a). Conserved synteny between pig chromosome 8 and human chromosome 4 but rearranged and distorted linkage maps. Genomics 17, 599–603.

    Google Scholar 

  • Ellegren, H., Johansson, M., Chowdhary, B.P., Marklund, S., Ruyter, D., Marklund, L., Nielsen, B.P., Edfors-Lilja, I., Gustavsson, I., Juneja, R.K., Andersson, L. (1993b). Assignment of 20 microsatellite markers to the porcine linkage map. Genomics 16, 431–439.

    Google Scholar 

  • Ellegren, H., Chowdhary, B.P., Johansson, M., Marklund, L., Fredholm, M., Gustavsson, I., Andersson, L. (1994a). A primary linkage map of the porcine genome reveals a low rate of recombination. Genetics 137, 1089–1100.

    Google Scholar 

  • Ellegren, H., Chowdhary, B., Johansson, M., Andersson, L. (1994b). Integrating the porcine physical and linkage map using cosmid-derived markers. Anim. Genet. 25, 155–164.

    Google Scholar 

  • Ernst, C.W., Vaske, D.A., Larson, R.G., Rothschild, M.F., (1993). MspI restriction fragment length polymorphism at the swine myogenin locus. J. Anim. Sci. 71, 3479.

    Google Scholar 

  • Farnetti, E., Davoli, R., Costosi, E., Russo, V. (1994). An EcoRI polymorphism at the porcine albumin (ALB) locus. Anim. Genet. 25, 65.

    Google Scholar 

  • Fredholm, M., Winterø, A.K., Christensen, K., Thomsen, P.D., Nielsen, P.B., Kristensen, B., Juneja, R.K., Archibald, A.L., Davies, W. (1992). Mapping of genetic markers in porcine backcross families. Anim. Genet. 23, Suppl. 1, 84–85.

    Google Scholar 

  • Fredholm, M., Winterø, A.K., Christensen, K., Kristensen, B., Nielsen, P.B., Davies, W., Archibald, A. (1993). Characterization of 24 porcine (dA-dC)n-(dT-dG)n microsatellites: genotyping of unrelated animals from four breeds and linkage studies. Mamm. Genome 4, 187–192.

    Google Scholar 

  • Gahne, B., Juneja, R.K. (1986). Extensive polymorphism of four plasma α-protease inhibitors in pigs and evidence for tight linkage between the structural loci of these inhibitors. Anim. Genet. 17, 135–157.

    Google Scholar 

  • Green, P., Falls, K., Crooks, S. (1990). Documentation for CRI-MAP, version 2.4. (St Louis: Washington University School of Medicine).

    Google Scholar 

  • Groenen, M.A.M., Ruyter, D., Verstege, E.J.M., de Vries, M., van der Poel, J.J. (1995). Development and mapping of 10 porcine microsatellite markers. Anim. Genet. 26, in press.

  • Gu, F., Harbitz, I., Chowdhary, B.P., Bosnes, M., Gustavsson, I. (1992). Localization of the hormone sensitive lipase (LIPE) and insulin receptor genes in pigs by in situ hybridization. Anim. Genet. 23, Suppl. 1, 92–93.

    Google Scholar 

  • Gu, F., Chowdhary, B.P., Johansson, M., Andersson, L., Gustavsson, I. (1994). Localization of the IGHG, PRKACB, and TNP2 genes in pigs by in situ hybridization. Mamm. Genome 5, 195–198.

    Google Scholar 

  • Gyapay, G., Morissette, J., Vignal, A., Dib, C., Fizames, C., Millasseau, P., Marc, S., Bernadi, G., Lathrop, M., Weissenbach, J. (1994). The 1993–94 Généthon human genetic linkage map. Nature Genet. 7, 246–339.

    Google Scholar 

  • Haldane, J.B.S. (1922). Sex ratio and unisexual sterility in hybrid animals. J. Genet. 12, 101–109.

    Google Scholar 

  • Haley, C.S., Archibald, A.L. (1992). Porcine genome analysis. In Genome Analysis, Vol. 4: Strategies for Physical Mapping, KE Davies, SM Tilghman, eds. (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press), pp. 99–129.

    Google Scholar 

  • Harbitz, I., Chowdhary, B.P., Chowdhary, R., Kran, S., Frengen, E., Gustavsson, I., Davies, W. (1990a). Isolation, characterization and chromosomal assignment of a partial cDNA for porcine 6-phosphogluconate dehydrogenase. Hereditas 112, 83–88.

    Google Scholar 

  • Harbitz, I., Chowdhary, B.P., Thomsen, P.D., Davies, W., Kaufmann, U., Kran, S., Gustavsson, I., Christensen, K., Hauge, J. (1990b). Assignment of the porcine calcium release channel gene, a candidate for the malignant hyperthermia locus, to the 6p11-q21 segment of chromosome 6. Genomics 8, 243–248.

    Google Scholar 

  • Høyheim, B., Keiserud, A., Chaput, B., Schmitz, A., Frelat, G., Davies, W. (1992a). Rapid isolation of porcine chromosome 6-specific microsatellites. Anim. Genet. 23, Suppl. 1, 91.

    Google Scholar 

  • Høyheim, B., Keiserud, A., Thomsen, P. (1992b). Direct sequencing and in situ hybridization of cosmids containing microsatellites. Anim. Genet. 23, Suppl. 1, 91.

    Google Scholar 

  • Høyheim, B., Keiserud, A., Thomsen, P.D. (1994a). A polymorphic porcine dinucleotide repeat S0294 (BHT34) at chromosome 6p11-q11. Anim. Genet. 25, 431.

    Google Scholar 

  • Høyheim, B., Keiserud, A., Thomsen, P.D. (1994b). A highly polymorphic porcine dinucleotide repeat S0295 (BHT40) at chromosome 9q14-q21. Anim. Genet. 26, in press.

  • Høyheim, B., Keiserud, A., Thomsen, P.D. (1994c). A highly polymorphic porcine dinucleotide repeat S0296 (BHT137) at chromosome 17q13. Anim. Genet. 26, in press.

  • Høyheim, B., Keiserud, A., Thomsen, P.D. (1994d). A polymorphic porcine dinucleotide repeat S0297 (BHT164) at chromosome 6p14-p15. Anim. Genet. 25, 431.

    Google Scholar 

  • Høyheim, B., Keiserud, A., Thomsen, P.D. (1994e). A polymorphic porcine dinucleotide repeat S0298 (BHT287) at chromosome 16q14. Anim. Genet. 26, in press.

  • Høyheim, B., Keiserud, A., Davies, W., Chaput, B., Schmitz, A., Frelat, G. (1994f). A highly polymorphic porcine dinucleotide repeat S0299 (BHA248) at chromosome 6. Anim. Genet. 26, in press.

  • Høyheim, B., Keiserud, A., Davies, W., Chaput, B., Schmitz, A., Frelat, G. (1994g). A polymorphic porcine dinucleotide repeat S0300 (BHA254) at chromosome 6. Anim. Genet. 26, in press.

  • Høyheim, B., Keiserud, A., Thomsen, P.D. (1994h). A highly polymorphic porcine dinucleotide repeat S0301 (BHT12) at chromosome 4p15. Anim. Genet. 25, 432.

    Google Scholar 

  • Johansson, M., Ellegren, H., Andersson, L. (1992a). Cloning and characterization of highly polymorphic porcine microsatellites. J. Hered. 83, 196–198.

    Google Scholar 

  • Johansson, M., Ellegren, H., Marklund, L., Gustavsson, U., Ringmar-Cederberg, E., Andersson, K., Edfors-Lilja, I., Andersson, L. (1992b). The gene for dominant white colour in the pig is closely linked to ALB and PDGFRA on chromosome 8. Genomics 14, 965–969.

    Google Scholar 

  • Johansson, M., Chowdhary, B., Gu, F., Ellegren, H., Gustavsson, I., Andersson, L. (1993). Genetic analysis of the gene for porcine submaxillary gland mucin: physical assignment of the MUC and interferon γ genes to chromosome 5. J. Hered. 84, 259–262.

    Google Scholar 

  • Johansson. M., Ellegren, H., Marklund, L., Coppieters, W., Andersson, L. (1994). Linkage maps of porcine Chromosome 3, 6, and 9 based on 31 polymorphic markers. Mamm. Genome 5, in press.

  • Juneja, R.K., Gahne, B., Edfors-Lilja, I., Andresen, E. (1983). Genetic variation at a serum protein locus, Po-2 and its assignment to the Phi, Hal, S, H, Pgd linkage group. Anim. Blood Groups Biochem. Genet. 14, 27–36.

    Google Scholar 

  • Jung, M., Chen, Y., Geldermann, H. (1994). Nine porcine polymorphic microsatellites (S0141–S0149). Anim. Genet. 25, 378.

    Google Scholar 

  • Keats, B.J.B., Sherman, S.L., Morton, N.E., Robson, E.B., Buetow, K.H., Cartwright, P.E., Chakravarti, A., Francke, U., Green, P.P., Ott, J. (1991). Guidelines for human linkage maps; an international system for human linkage maps (ISLM 1990). Genomics 9, 557–560.

    Google Scholar 

  • Kosambi, D.D. (1944). The estimation of map distances from recombination values. Ann. Eugen. 12, 172–175.

    Google Scholar 

  • Lahbib-Mansais, Y., Yerle, M., Dalens, M., Chevalet, C., Gellin, J. (1993). Localization of pig Na+, K+ ATPase alpha-subunit and beta-subunit genes to chromosome 4 by radioactive in situ hybridization. Genomics 15, 91–97.

    Google Scholar 

  • Larsen, N.J., Nielsen, V.H. (1993). Apal and CfoI polymorphisms in the porcine growth hormone gene. Anim. Genet. 24, 71.

    Google Scholar 

  • Mariani, P., Johansson, M., Ellegren, H., Andersson, L. (1991a). A TaqI restriction fragment length polymorphism at the porcine platelet-derived growth factor β-receptor locus (PDGFRB). Anim. Genet. 22, 446.

    Google Scholar 

  • Mariani, P., Johansson, M., Ellegren, H., Andersson, L. (1991b). TaqI and PvuII restriction fragment length polymorphisms at the porcine plasminogen activator, urokinase, locus (PLAU). Anim. Genet. 22, 447.

    Google Scholar 

  • Mariani, P., Johansson, M., Ellegren, H., Harbitz, I., Juneja, R.K., Andersson, L. (1992). Multiple restriction fragment length polymorphisms in the porcine calcium release channel (CRC): Assignment to the halothane (HAL) linkage group. Anim. Genet. 23, 257–262.

    Google Scholar 

  • Marklund, L., Winterø, A.K., Thomsen, P.D., Johansson, M., Fredholm, M., Gustafsson, U., Andersson, L. (1993). A linkage group on pig chromosome 4 comprising the loci for blood group L, GBA, ATP1B1 and three microsatellites. Anim. Genet. 24, 333–338.

    Google Scholar 

  • McQueen, H.A., Yerle, M., Archibald, A.L. (1994). Anchorage of an unassigned linkage group to pig Chromosome 10 using P1 clones. Mamm. Genome 5, 646–648.

    Google Scholar 

  • Mellink, C.H.M., Lahbib-Mansais, Y., Yerle, M., Gellin, J. (1993). Localization of four new markers to pig chromosomes 1, 6 and 14 by radioactive in situ hybridization. Cytogenet. Cell Genet. 64, 256–260.

    Google Scholar 

  • Mcllink, C.H.M., Lahbib-Mansais, Y., Yerle, M., Gellin, J. (1994a). Mapping of the regulatory type I alpha and catalytic beta subunits of cAMP-dependent protein kinase and interleukin 1 alpha and 1 beta in the pig. Mamm. Genome 5, 298–302.

    Google Scholar 

  • Mellink, C.H.M., Labbib-Mansais, Y., Yerle, M., Gellin, J. (1994b). PCR amplification, cloning and localization of the genes for pig FSHB and LHB. Cytogenet. Cell Genet., in press.

  • Moran, C. (1993). Microsatellite repeats in pig (Sus domestica) and chicken (Gallus domesticus) genomes. J. Hered. 84, 274–280.

    Google Scholar 

  • Murkami, Y., Itoh, T., Ohata, K., Yasue, H. (1994). Chromosomal assignment of porcine genes by fluorescence in situ hybridization. Anim. Genet. 25, Suppl. 2, 52.

    Google Scholar 

  • O'Brien, S.J. (1991). Mammalian genome mapping: lessons and prospects. Curr. Opin. Genet. Dev. 1, 105–111.

    Google Scholar 

  • O'Brien, S.J., Womack, J.E., Lyons, L.A., Moore, K.J., Jenkins, N.A., Copeland, N.G. (1993). Anchored reference loci for comparative genome mapping in mammals. Nature Genet. 3, 103–112.

    Google Scholar 

  • Poulsen, P.H., Thomsen, P.D., Olsen, J. (1991). Assignment of the porcine aminopeptidase (PEPN) gene to chromosome 7cen->q21. Cytogenet. Cell Genet. 57, 44–46.

    Google Scholar 

  • Rabin, M., Fries, R., Singer, D., Ruddle, F.H. (1985). Assignment of the porcine major histocompatibility complex to chromosome 7 by in situ hybridization. Cytogenet. Cell Genet. 39, 206–209.

    Google Scholar 

  • Rahman, A., Woolard, J., Rothschild, M.F., Tuggle, C.K. (1994). An SstI polymorphism at the swine OCT-11 locus. J. Anim. Sci. 72, 2201.

    Google Scholar 

  • Renard, C., Kristensen, B., Gautschi, C., Hruban, V., Fredholm, M., Vaiman, M. (1988). Joint report of the first international comparison test on swine lymphocyte alloantigens (SLA). Anim. Genet. 19, 63–72.

    Google Scholar 

  • Rettenberger, G., Fries, R., Engel, W., Scheit, K.L.H., Dolf, G., Hameister, H. (1994a). Establishment of a partially informative porcine somatic cell hybrid panel and assignment of the loci for transition protein 2 (TNP2) and protamine (PRM1) to chromosome 3 and polyubiquitin (UBC) to chromosome 14. Genomics 21, 558–566.

    Google Scholar 

  • Rettenberger, G., Fredholm, M., Fries, R., (1994b). Chromosomal assignment of porcine microsatellites by use of a somatic cell hybrid mapping pane. Anim. Genet. 25, 343–345.

    Google Scholar 

  • Robic, A., Parrou, J.L., Yerle, M., Gourreau, A., Dalens, M., Milan, D., Gellin, J. (1995). Pig microsatellites isolated from cosmids revealing polymorphism and localized on chromosomes. Anim. Genet. 26, in press.

  • Robic, A., Dalens, M., Woloszyn, N., Milan, D., Riquet, J., Gellin, J. (1994). Isolation of 28 new porcine microsatellites revealing polymorphism. Mamm. Genome 5, 580–583.

    Google Scholar 

  • Rohrer, G.A., Alexander, L.J., Keele, J.W., Smith, T.P., Beattie, C.W. (1994). A microsatellite linkage map of the porcine genome. Genetics 136, 231–245.

    Google Scholar 

  • Rothschild, M.F., Larson, R.G., Jacobson, C., Pearson, P. (1991). PvuII polymorphisms at the porcine oestrogen receptor locus (ESR). Anim. Genet. 22, 448.

    Google Scholar 

  • Ruohonen-Lehto, M.K., Rothschild, M.F., Larson, R.G., Warner, C.M. (1992). MspI and SstI RFLPs at the porcine prolactin locus (PRL). Anim. Genet. 23, 573.

    Google Scholar 

  • Ruyter, D., Verstege, A.J.M., van der Poel, J.J., Groenen, M.A.M. (1994a). Five porcine polymorphic microsatellites. Anim. Genet. 25, 53.

    Google Scholar 

  • Ruyter, D., Johansson, M., Groenen, M., Andersson, L. (1994b). A porcine polymorphic microsatellite locus (S0098). Anim. Genet. 25, 198.

    Google Scholar 

  • Sarmiento, U.M., Kadavil, K. (1993). Mapping of the porcine apolipoprotein B (APOB) gene to Chromosome 3 by fluorescence in situ hybridization. Mamm. Genome 4, 66–67.

    Google Scholar 

  • Schmitz, A., Chardon, P., Gainche, I., Chaput, B., Guilly, M.N., Frelat, G., Vaiman, M. (1992). Swine chromosomal DNA quantification by bivariate flow karyotyping and karyotype interpretation. Cytometry 12, 703–710.

    Google Scholar 

  • Schmitz, C.B., Rothschild, M.F., Tuggle, C.F. (1993). BslI polymorphism at the swine α-actinin2 locus. J. Anim. Sci. 71, 3477.

    Google Scholar 

  • Schmitz, C.B., Rothschild, M.F., Tuggle, C.K. (1994). Length polymorphism in the swine α-actin locus. J. Anim. Sci. 72, 1910.

    Google Scholar 

  • Signer, E.N., Gu, F., Gustavsson, I., Andersson, L., Jeffreys, A.J. (1994). A pseudoautosomal minisatellite in the pig. Mamm. Genome 5, 48–51.

    Google Scholar 

  • Solinas, S., Hasler-Rapacz, J., Maeda, N., Rapacz, J., Fries R. (1992a). Assignment of the pig apolipoprotein B locus (APOB) to chromosome region 3q2.4-qter. Anim. Genet. 23, 71–75.

    Google Scholar 

  • Solinas, S., Pauli, U., Kuhnert, P., Peterhans, E., Fries, R. (1992b). Assignment of the porcine tumour necrosis factor alpha and beta genes to the chromosome region 7p11-q11 by in situ hybridization. Anim. Genet. 23, 267–271.

    Google Scholar 

  • Thomsen, P.D., Fredholm, M., Christensen, K., Schwerin, M. (1990). Assignment of the porcine growth hormone gene to chromosome 12. Cytogenet. Cell Gent. 54, 92–94.

    Google Scholar 

  • Thomsen, P.D., Qvist, H. Marklund, L., Andersson, L., Sjostrom, H., Noren, O. (1993). Assignment of the dipeptidylpeptidase IV (DPP4) gene to pig Chromosome 15q21. Mamm. Genome 4, 604–607.

    Google Scholar 

  • Thomsen, P.D., Johansson, M., Troelsen, J.T., Andersson, L. (1995). The lactase-phlorizin hydrolase (LCT) gene maps to pig chromosome 15q13. Anim. Genet. 26, in press.

  • Tuggle, C.K., Yu, T-P., Helm, J., Rothschild, M.F. (1993). Cloning and restriction fragment length polymorphism analysis of a cDNA for swine PIT-1, a gene controlling growth hormone expression. Anim. Genet. 24, 17–21.

    Google Scholar 

  • Tuggle, C.K., Helm, J., Rothschild, M.F. (1994). Cloning, sequencing and restriction fragment length polymorphism analysis of a porcine cDNA for OCT2. Anim. Genet. 25, 141–145.

    Google Scholar 

  • Vaske, D.A., Ruohonen-Lehto, M.K., Larson, R.G., Warner, C.M., Rothschild, M.F. (1994a). Restriction fragment length polymorphisms at the porcine transporter associated with antigen processing 1 (TAP1) locus. J. Anim. Sci. 72, 255.

    Google Scholar 

  • Vaske, D.A., Liu, H.C., Larson, R.G., Warner, C.M., Rothschild, M.F. (1994b). TaqI restriction fragment length polymorphism at the porcine transporter associated with antigen processing 2 (TAP2) locus. J. Anim. Sci. 72, 798.

    Google Scholar 

  • Wilke, K., Jung, M., Chen, Y., Geldermann, G. (1994). Porcine (GT)n sequences: structure and association with dispersed and tandem repeats. Genomics 21, 63–70.

    Google Scholar 

  • Winterø, A.K., Fredholm, M. (1994). Three porcine polymorphic microsatellite loci (S0078, S0079, S0157). Anim. Genet. 25, 436.

    Google Scholar 

  • Winterø, A.K., Fredholm, M., Thomsen, P.D., (1992). Variable (dG-dT)n-(dC-dA)n sequences in the porcine genome. Genomics 12, 281–288.

    Google Scholar 

  • Winterø, A.K., Fredholm, M., Andersson, L. (1994a). Assignment of the gene for porcine insulin-like growth factor 1 (IGF1) to chromosome 5 by linkage mapping. Anim. Genet. 25, 37–39.

    Google Scholar 

  • Winterø, A.K., Fredholm, M., Thomsen, P.D. (1994b). A porcine polymorphic microsatellite locus (S0077) at chromosome 16q14. Anim. Genet. 25, 122.

    Google Scholar 

  • Winterø, A.K., Chowdhary, B., Fredholm, M. (1994c). A porcine polymorphic microsatellite locus (S0076) at chromosome 13q12. Anim. Genet. 25, 430.

    Google Scholar 

  • Yerle, M., Gellin, J., Dalens, M., Galman, O. (1990a). Localization on pig chromosome 6 of markers GPI, APOE and ENO1 carried by human chromosomes 1 and 19 using in situ hybridization. Cytogenet. Cell Genet. 54, 86–91.

    Google Scholar 

  • Yerle, M., Archibald, A.L., Dalens, M., Gellin, J. (1990b). Localization of the PGD and TGFβ-1 loci to pig chromosome 6q. Anim. Genet. 21, 411–417.

    Google Scholar 

  • Yerle, M., Lahbib-Mansais, Y., Thomsen, P.D., Gellin, J. (1993). Localization of the porcine growth hormone gene to chromosome 12p1.2-p1.5. Anim. Genet. 24, 129–131.

    Google Scholar 

  • Yerle, M., Goureau, A., Gellin, J., Le Tissier, P., Moran, C. (1994). Rapid assignment of cosmid clones on pig chromosomes by fluorescence in situ hybridization. Mamm. Genome 5, 34–37.

    Google Scholar 

  • Yerle, M., Lahbib-Mansais, Y., Mellink, C., Goureau, A., Pinton, P., Echard, G., Gellin, J., Schmitz, A., Chaput, B., Frelat, G., Zijlstra, C., De Haan, N., Bosma, A.A., Chowdhary, B.P., Gu, F., Gustavsson, I., Thomsen, P.D., Christensen, K., Rettenberger, G., Hameister, H. (1995). The PiGMaP Consortium cytogenetic map of the domestic pig (Sus scrofa domestica). Mamm. Genome, in press.

  • Zambonelli, P., Davoli, R., Bigi, D., Farnetti, E., Russo, V. (1993). A BglII polymorphism at the porcine γ-glutamyl transpeptidase (GGT) locus. Anim. Genet. 24, 217.

    Google Scholar 

  • Zambonelli, P., Davoli, R., Dall'Olio, S., Russo, V. (1994). A MspI polymorphism at the porcine γ-glutamyl transpeptidase (GGT) locus. Anim. Genet. 25, 66.

    Google Scholar 

  • Ziegle, J.S., Su, Y., Corcoran, K.P., Nie, L., Mayrand, P.E., Hoff, L.B., McBride, L.J., Kronick, M.N., Diehl, S.R. (1992). Application of automated DNA sizing technology for genotyping microsatellite loci. Genomics. 14, 1026–1031.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Archibald, A.L., Haley, C.S., Brown, J.F. et al. The PiGMaP consortium linkage map of the pig (Sus scrofa). Mammalian Genome 6, 157–175 (1995). https://doi.org/10.1007/BF00293008

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00293008

Keywords

Navigation