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Chromosome localization and orientation of the simple sequence repeat of human satellite I DNA

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Abstract

The predominant chromosomal locations of human satellite I DNA were detected using fluorescent in situ hybridization (FISH). Synthetic deoxyoligonucleotides designed from consensus sequences of the simple sequence repeats of satellite 1 were used as probes. The most abundant satellite I repeat, the-A-B-A-B-A-form, is located at the pericentromeric regions of chromosomes 3, 4, 13, 14, 15, 21, and 22. The less abundant-B-B-B-form was not detected on chromosome 4, but was present at all the other locations. A variation of FISH that allows strand-specific hybridization of single-stranded probes (CO-FISH) determined that the human satellite I sequences are predominantly arranged in head-to-tail fashtion along the DNA strand.

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References

  • Corneo G, Ginelli E, Polli E (1967) A satellite DNA isolated from human tissues. J Mol Biol 23:619–622

    Google Scholar 

  • Corneo G, Ginelli E, Polli E (1968) Isolation of the complementary strands of a human satellite DNA. J Mol Biol 33:331–335

    Google Scholar 

  • Corneo G, Ginelli E, Polli E (1970) Repeated sequences in human DNA. J Mol Biol 48:319–327

    Google Scholar 

  • Frommer M, Prosser J, Tkachuk D, Reisner AH, Vincent PC (1982) Simple repeated sequences in human satellite DNA. Nucleic Acids Res 10:547–563

    Google Scholar 

  • Frommer M, Prosser J, Vincent PC (1984) Human satellite I sequences include a male specific 2.47 kb tandemly repeated unit containing one Alu family member per repeat. Nucleic Acids Res 12:2887–2900

    Google Scholar 

  • Goodwin E, Meyne J (1993) Strand-specific FISH reveals orientation of chromosome 18 alphoid DNA. Cytogenet Cell Genet 63:126–127

    Google Scholar 

  • Gosden JR, Mitchell AR, Buckland RA, Clayton RP, Evans HJ (1975) The location of four human satellite DNAs on human chromosomes. Exp Cell Res 92:148–158

    Google Scholar 

  • Grady DL, Ratliff RL, Robinson DL, McCanlies EC, Meyne J, Moyzis RK (1992) Highly conserved repetitive DNA sequences are present at human centromeres. Proc Natl Acad Sci USA 89:1695–1699

    Google Scholar 

  • Jones KW, Purdom IF, Prosser J, Corneo G (1974) The chromosomal localisation of human satellite DNA I. Chromosoma 49:161–171

    Google Scholar 

  • Kalitsis P, Earle E, Vissel B, Shaffer LG, Choo KHA (1993) A chromosome 13-specific human satellite I DNA subfamily with minor presence on chromosome 21: further studies on Robertsonian translocations. Genomics 16:104–112

    Google Scholar 

  • Meyne J, Moyzis RK (1989) Human chromosome-specific repetitive DNA probes: Targeting in situ hybridization to chromosome 17 with a 42 base pair alphoid DNA oligomer. Genomics 4:472–478

    Google Scholar 

  • Meyne J, Littlefield LG, Moyzis RK (1989) Labeling of human centromeres using an alphoid DNA consensus sequence: Application to the scoring of chromosome aberrations. Mutat Res 226:75–79

    Google Scholar 

  • Meyne J, Baker RJ, Hobart HH, Hsu TC, Ryder OA, Ward OG Wiley JE, Wurster-Hill DH, Yates TL, Moyzis RK (1990) Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequence in vertebrate chromosomes. Chromosoma 99:3–10

    Google Scholar 

  • Mitchell AR, Beauchamp RS, Bostock CJ (1979) A study of sequence homologies in four satellite DNAs of man. J Mol Biol 135:127–149

    Google Scholar 

  • Moyzis RK, Albright KL, Bartholdi MF, Cram LS, Deaven LL, Hildebrand CE, Joste NE, Longmire JL, Meyne J, Schwarzacher-Robinson T (1987) Human chromosome specific repetitive DNA sequences: Novel markers for genetic analysis. Chromosoma 95:375–386

    Google Scholar 

  • Moyzis RK, Buckingham JM, Cram LS, Dani M, Deaven LL, Jones MD, Meyne J, Ratliff RL, Wu J-R (1988) A highly conserved repetitive DNA sequence (TTAGGG)n, present at the telomeres of human chromosomes. Proc Natl Acad Sci USA 85:6622–6626

    Google Scholar 

  • Moyzis RK, Torney DC, Meyne J, Buckingham JM, Wu J-R, Burks C, Sirotkin KM, Goad WB (1989) The distribution of interspersed repetitive DNA sequences in the human genome. Genomics 4:273–289

    Google Scholar 

  • Prosser J, Frommer M, Paul C, Vincent PC (1986) Sequence relationships of three human satellite DNAs. J Mol Biol 187:145–155

    Google Scholar 

  • Trask BJ, Massa H, Kenwrick S, Gitschier J (1991) Mapping of human chromosome Xq28 by two-color fluorescence in situ hybridization of DNA sequences to interphase cell nuclei. Am J Hum Genet 48:1–15

    Google Scholar 

  • Trowell HE, Nagy A, Vissel B, Choo KHA (1993) Long-range analyses of the centromeric regions of human chromosomes 13, 14 and 21: identification of a narrow domain containing two key centromeric DNA elements. Hum Mol Genet 2: 1639–1649

    Google Scholar 

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Meyne, J., Goodwin, E.H. & Moyzis, R.K. Chromosome localization and orientation of the simple sequence repeat of human satellite I DNA. Chromosoma 103, 99–103 (1994). https://doi.org/10.1007/BF00352318

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  • DOI: https://doi.org/10.1007/BF00352318

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