Skip to main content
Log in

An antecedent of the MHC-linked genomic region in amphioxus

  • Brief Communication
  • Published:
Immunogenetics Aims and scope Submit manuscript

Abstract

The MHC genes on human chromosome 6 are located within one of the best-characterised paralogy regions of the human genome. Numerous genes mapping around this location, 6p21, have paralogues at one, two or three other chromosomal locations on HSA 1, 9 and 19. The similarity between these four chromosomal regions suggests the linkages may have adaptive significance, and/or they may be echoes of segmental or genome duplication in human ancestry. Here, we show that six amphioxus cosmids, containing genes orthologous to those from the human MHC-linked paralogy regions, map to a single amphioxus chromosome. The composition of the MHC-linked genomic region, therefore, pre-dates vertebrate origins.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2a–h

References

  • Abi-Rached L, Gilles A, Shiina T, Pontarotti P, Inoko H (2002) Evidence of en bloc duplication in vertebrate genomes. Nat Genet 31:100–105

    Article  CAS  PubMed  Google Scholar 

  • Castro LFC, Holland PWH (2002) Fluorescent in situ hybridisation to amphioxus chromosomes. Zool Sci 19:1349–1353

    CAS  PubMed  Google Scholar 

  • Danchin EG, Abi-Rached L, Gilles A, Pontarotti P (2003) Conservation of the MHC-like region throughout evolution. Immunogenetics 55:141–8

    Article  CAS  PubMed  Google Scholar 

  • Flajnik MF, Kasahara M (2001) Comparative genomics of the MHC: glimpses into the evolution of the adaptive immune system. Immunity 15:351–362

    PubMed  Google Scholar 

  • Furlong RF, Holland PWH (2002) Were vertebrates octoploid? Philos Trans Lond B Biol Sci 357:531–544

    Article  CAS  Google Scholar 

  • Hughes AL (1998) Phylogenetic tests of the hypothesis of block duplication of homologous genes on human chromosomes 6, 9, and 1. Mol Biol Evol 5:854–870

    Google Scholar 

  • Kasahara M (1999) The chromosomal duplication model of the major histocompatibility complex. Immunol Rev 167:17–32

    CAS  PubMed  Google Scholar 

  • Larhammar D, Lundin LG, Hallbook F (2002) The human Hox-bearing chromosome regions did arise by block or chromosome (or even genome) duplications. Genome Res 12:1910–1920

    Article  CAS  PubMed  Google Scholar 

  • Lundin L (1993) Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse. Genomics 16:1–19

    Article  CAS  PubMed  Google Scholar 

  • Pollard SL, Holland PWH (2000) Evidence for 14 homeobox gene clusters in human genome ancestry. Curr Biol 10:1059–1062

    Google Scholar 

  • Smith MP, Sansom IJ, Cochrane KD (2001) The Cambrian origin of vertebrates. In: Ahlberg, PE (ed) Major events in early vertebrate evolution. Taylor and Francis, London

  • Trachtulec Z, Hamvas RM, Forejt J, Lehrach HR, Vincek V, Klein J (1997) Linkage of TATA-binding protein and proteasome subunit C5 genes in mice and humans reveals synteny conserved between mammals and invertebrates. Genomics 44:1–7

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

This research was funded by the Fundação para a Ciência e a Tecnologia, Portugal (BD/21818/99 to LFCC) and the BBSRC (to RFF and PWHH). We thank Pierre Pontarotti and colleagues for helpful discussions.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Peter W. H. Holland.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Castro, L.F.C., Furlong, R.F. & Holland, P.W.H. An antecedent of the MHC-linked genomic region in amphioxus. Immunogenetics 55, 782–784 (2004). https://doi.org/10.1007/s00251-004-0642-9

Download citation

  • Received:

  • Revised:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00251-004-0642-9

Keywords

Navigation