Skip to main content
Log in

Organization of assembly factors Cbp3p and Cbp4p and their effect on bc1 complex assembly in Saccharomyces cerevisiae

  • Research Article
  • Published:
Current Genetics Aims and scope Submit manuscript

Abstract

The bc1 complex (complex III) of Saccharomyces cerevisae is composed of ten subunits that are assembled in the inner mitochondrial membrane. Cbp3p and Cbp4p are two mitochondrial proteins which are postulated to act as chaperones in bc1 complex formation. Here, we show by blue native PAGE that cbp3Δ and cbp4Δ mutants are disturbed in complex III assembly and accumulate intermediate-sized forms of the complex. Moreover, deletion of CBP3 interferes with the formation of complex III/IV supracomplexes. Our studies show that Cbp3p and Cbp4p interact and are present in high-molecular-weight complexes, some of which might represent intermediates of complex III assembly. Overexpression of Cbp4p cannot substitute for the function of Cbp3p, but high-level expression of Cbp3p can partially compensate for the lack of Cbp4p. The finding that mitochondria of cbp3Δ and cbp4Δ mutants exhibit a wild-type lipid composition favors the idea that Cbp3p and Cbp4p are specific assembly factors for complex III rather than components of the mitochondrial lipid metabolism.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9

Similar content being viewed by others

References

  • Barrientos A, Barros MH, Valnot I, Rotig A, Rustin P, Tzagoloff A (2002) Cytochrome oxidase in health and disease. Gene 286:53–63

    Article  Google Scholar 

  • Berden JA, Schoppink PJ, Grivell LA (1988) A model for the assembly of ubiquinol:cytochrome c oxidoreductase in yeast. In: Palmieri F, Quagliariello E (eds) Molecular basis of biomembrane transport. Elsevier, Amsterdam, pp 195–208

    Google Scholar 

  • Bligh EG, Dyer WJ (1959) A rapid method of total lipid extraction and purification. Can J Med Sci 37:911–917

    Google Scholar 

  • Crivellone MD (1994) Characterization of CBP4, a new gene essential for the expession of ubiquinol cytochrome c reductase in Saccharomyces cerevisiae. J Biol Chem 269:21284–21292

    Google Scholar 

  • Crivellone MD, Wu MA, Tzagoloff A (1988) Assembly of the mitochondrial membrane system. Analysis of structural mutants of the yeast coenzyme QH2-cytochrome c reductase complex. J Biol Chem 263:14323–14333

    Google Scholar 

  • Cruciat CM, Brunner S, Baumann F, Neupert W, Stuart RA (2000) The cytochrome bc1 and cytochrome c oxidase complexes associate to form a single supracomplex in yeast mitochondria. J Biol Chem 275:18093–18098

    Article  Google Scholar 

  • Cruciat CM, Hell K, Folsch H, Neupert W, Stuart RA (1999) Bcs1p, an AAA-family member, is a chaperone for the assembly of the cytochrome bc(1) complex. EMBO J 18:5226–5233

    Article  Google Scholar 

  • Daum G, Böhni PC, Schatz G (1982) Import of proteins into mitochondria. Cytochrome b2 and cytochrome c peroxidase are located in the intermembrane space of yeast mitochondria. J Biol Chem 257:13028–13033

    Google Scholar 

  • Vries S de, Marres CAM (1987) The mitochondrial respiratory chain of yeast. Structure and biosynthesis and the role in cellular metabolism. Biochim Biophys Acta 895:205–239

    Google Scholar 

  • Dowhan W (1997) Molecular basis for membrane phospholipid diversity: why are there so many lipids? Annu Rev Biochem 66:199–232

    Article  Google Scholar 

  • Ellis RJ, Vries SM van der (1991) Molecular chaperones. Annu Rev Biochem 60:321–347

    Article  CAS  PubMed  Google Scholar 

  • Gomez B Jr, Robinson NC (1999) Phospholipase digestion of bound cardiolipin reversibly inactivates bovine cytochrome bc1. Biochemistry 38:9031–9038

    Article  Google Scholar 

  • Gu Z, Valianpour F, Chen S, Vaz FM, Hakkaart GA, Wanders RJA, Greenberg ML (2004) Aberrant cardiolipin metabolism in the yeast taz1 mutant: a model for Barth syndrome. Mol Microbiol 51:149–158

    Article  Google Scholar 

  • Kaiser C, Michaelis S, Mitchell A (1994) Methods in yeast genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.

    Google Scholar 

  • Katan MB, Pool L, Groot GS (1976) The cytochrome bc1 complex of yeast mitochondria. Isolation and partial characterization of the cytochrome bc1 complex and cytochrome b. Eur J Biochem 65:95–105

    Google Scholar 

  • Knop M, Siegers K, Pereira G, Zachariae W, Winsor B, Nasmyth K, Schiebel E (1999) Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines. Yeast 15:963–972

    Article  Google Scholar 

  • Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685

    PubMed  Google Scholar 

  • Lange C, Hunte C. (2002) Crystal structure of the yeast cytochrome bc1 complex with its bound substrate cytochrome c. Proc Natl Acad Sci USA 99:2800–2805

    Article  Google Scholar 

  • Lange C, Nett JH, Trumpower BL, Hunte C (2001) Specific roles of protein–phospholipid interactions in the yeast cytochrome bc1 complex structure. EMBO J 20:6591–600

    Article  Google Scholar 

  • Lee SY, Hunte C, Malaney S, Robinson BH (2001) The N-terminus of the Qcr7 protein of the cytochrome bc1 complex in S. cerevisiae may be involved in facilitating stability of the subcomplex with the Qcr8 protein and cytochrome b. Arch Biochem Biophys 393:215–221

    Google Scholar 

  • Lode A, Kuschel M, Paret C, Rodel G. (2000) Mitochondrial copper metabolism in yeast: interaction between Sco1p and Cox2p. FEBS Lett 485:19–24

    Article  Google Scholar 

  • Meisinger C, Sommer T, Pfanner N (2000) Purification of Saccharomcyes cerevisiae mitochondria devoid of microsomal and cytosolic contaminations. Anal Biochem 287:339–342

    Article  Google Scholar 

  • Mumberg D, Müller R, Funk M (1995) Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 156:119–122

    Article  Google Scholar 

  • Nijtmans LG, Henderson NS, Holt IJ (2002) Blue native electrophoresis to study mitochondrial and other protein complexes. Methods 26:327–34

    Article  Google Scholar 

  • Nobrega FG, Nobrega MP, Tzagoloff A (1992) BCS1, a novel gene required for the expession of functional Rieske iron-sulphur protein in Saccharomyces cerevisiae. EMBO J 11:3821–3829

    Google Scholar 

  • Pel HJ, Tzagoloff A, Grivell LA (1992) The identification of 18 nuclear genes required for the expression of the yeast mitochondrial gene encoding cytochrome c oxidase subunit 1. Curr Genet 21:139–146

    Article  Google Scholar 

  • Rödel G (1997) Translational activator proteins required for cytochrome b synthesis in Saccharomyces cerevisiae. Curr Genet 3:375–379

    Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.

    Google Scholar 

  • Saraste M (1999) Oxidative phosphorylation at the fin de siècle. Science 283:1488–1493

    Article  Google Scholar 

  • Schägger H (2001) Blue-native gels to isolate protein complexes from mitochondria. Methods Cell Biol 65:231–244

    Google Scholar 

  • Schägger H (2002) Respiratory chain supercomplexes of mitochondria and bacteria. Biochim Biophys Acta 1555:154–159

    Google Scholar 

  • Schägger H, Hagen T, Roth B, Brandt U, Link TA, Jagow G von (1990) Phospholipid specificity of bovine heart bc1 complex. Eur J Biochem 190:123–130

    Google Scholar 

  • Schägger H, Pfeiffer K (2000) Supercomplexes in the respiratory chains of yeast and mammalian mitochondria. EMBO J 19:1777–1783

    Article  Google Scholar 

  • Schiestl RH, Gietz RD (1989) High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier. Curr Genet 16:339–346

    Article  Google Scholar 

  • Schmitt ME, Trumpower BL (1990) Subunit 6 regulates half-of-the-sites reactivity of the dimeric cytochrome bc1 complex in Saccharomcyes cerevisiae. J Biol Chem 265:17005–17011

    Google Scholar 

  • Shi G, Crivellone MD, Edderkaoui B (2001) Identification of functional regions of Cbp3p, an enzyme specific chaperone required for the assembly of ubiquinol-cytochrome c reductase in yeast mitochondria. Biochim Biophys Acta 1506:103–116

    Google Scholar 

  • Tzagoloff A, Nobrega M, Gorman N, Sinclair P (1993) On the functions of the yeast COX 10 and COX 11 gene products. Biochem Mol Biol Int 31:593–598

    Google Scholar 

  • Wu M and Tzagoloff A (1989) Identification and characterization of a new gene (CBP3) required for the expression of yeast coenzyme QH2 -cytochrome c reductase. J Biol Chem 264:11122–30

    Google Scholar 

  • Zara V, Palmisano I, Conte L, Trumpower BL (2004) Further insights into the assembly of the yeast cytochrome bc1 complex based on analysis of single and double deletion mutants lacking supernumerary subunits and cytochrome b. Eur J Biochem 271:1209–1218

    Article  Google Scholar 

  • Zhang M, Mileykovskaya E, Dowhan W (2002) Gluing the respiratory chain together. Cardiolipin is required for supercomplex formation in the inner mitochondrial membrane. J Biol Chem 277:43553–43556

    Google Scholar 

  • Zhong Q, Gohil VM, Ma L, Greenberg ML (2004) Absence of cardiolipin results in temperature sensitivity, respiratory defects, and mitochondrial DNA instability independent of pet56. J Biol Chem 279:32294–32300

    Article  Google Scholar 

Download references

Acknowledgements

We thank U. Krause-Buchholz for helpful discussion and useful comments on the BN-PAGE experiments and Ch. Thiele (Max Planck Institute for Molecular Cell Biology and Genetics, Dresden) for providing us with materials for lipid analysis.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Zuzana Kronekova.

Additional information

Communicated by M. Brunner

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kronekova, Z., Rödel, G. Organization of assembly factors Cbp3p and Cbp4p and their effect on bc1 complex assembly in Saccharomyces cerevisiae. Curr Genet 47, 203–212 (2005). https://doi.org/10.1007/s00294-005-0561-9

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00294-005-0561-9

Keywords

Navigation