Mouse major (γ) satellite DNA is highly conserved and organized into extremely long tandem arrays: Implications for recombination between nonhomologous chromosomes
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Nde1 is required for heterochromatin compaction and stability in neocortical neurons
2022, iScienceCitation Excerpt :To further determine the impact of aberrant H4K20me3 and heterochromatin compaction on heterochromatin integrity, we asked whether Nde1 LOF results in changes in DNA sequence of heterochromatic repeats because chromatin compaction by H4K20me3 prevents unscheduled homologous recombination of the underlying repetitive DNA (Bierhoff et al., 2014; Marion et al., 2009; Schotta et al., 2008; Wongtawan et al., 2011). In mice, the pericentromeric heterochromatin consists of large uninterrupted arrays of AT-rich major satellite repeats 234 base pairs in length that can extend more than 2 megabases per chromosome (Vissel and Choo, 1989). Because these extremely long repetitive DNA sequences are difficult to assess by Next Generation Sequencing, we used a PCR-based strategy to amplify MajSat monomers, cloned the PCR products, and sequenced each individual PCR clone by Sanger sequencing.
Close to the edge: Heterochromatin at the nucleolar and nuclear peripheries
2021, Biochimica et Biophysica Acta - Gene Regulatory MechanismsViewing Nuclear Architecture through the Eyes of Nocturnal Mammals
2020, Trends in Cell BiologyCitation Excerpt :Thus, the volume of the rod nucleus, which is ca. 5 μm in diameter, is divided approximately in half between EC and HC. While the central rod chromocenter (cHC) occupies about 6% of nuclear volume, it constitutes about 10% of the entire mouse genome [27,28]. This suggests about 1.8-fold higher volume density in the chromocenter than in the rest of the chromatin and is consistent with an approximately twofold higher density in the densest region in the conventional interphase nucleus and mitotic chromosomes measured by ChromEMT [29].
Stella controls chromocenter formation through regulation of Daxx expression in 2-cell embryos
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