Human DNA polymorphisms and methods of analysis

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    In other studies, the presence and nature of repeats have been shown to be of great value in phylogenetic analyses (Cavalier-Smith, 2002; Nie et al., 2012). Microsatellites (SSRs) are useful markers for population genetics, conservation genetics and species delineation (Gupta et al., 1996; Powell et al., 1995; Weber, 1990), and have been widely used in endangered Lauraceae (Santos et al., 2008a, 2008b; Zhai et al., 2010). The chloroplast of L. glutinosa contained 56 SSRs, 50 (89%) and 6 (11%) being mono- and di- nucleotides SSRs, respectively (Table 4).

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    It is essential to understand sequence properties and associate them with biological functions. Effective mathematical methods have been developed to search for short tandem repeats including mini- and microsatellites (Gulcher, 2012; Merkel and Gemmell, 2008; Weber, 1990). Mini- and microsatellites play a key role in genome evolution by providing increased recombination rate (Myers et al., 2008; Richard and Pâques, 2000; Usdin, 2008).

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