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Direct evidence for ribonucleolytic activity of a PR-10-like protein from white lupin roots

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Abstract

An abundant 17 kDa protein which was isolated and characterized from 10-day old healthy root tissue of white lupin (Lupinus albus) proved to have a high sequence similarity to pathogenesis-related proteins found in other species. Subsequently, a corresponding clone (LaPR-10) was identified in a cDNA library prepared from the same tissue that exhibited a high amino acid sequence similarity to a number of the PR-10 family proteins. The clone contains an open reading frame encoding a polypeptide of 158 amino acids, with a predicted molecular mass of 16 905 Da and an isoelectric point of 4.66. Southern blot analysis indicates that LaPR-10 is likely a single-copy gene, or a member of a small gene family. The clone was expressed in Escherichia coli, and its protein product was purified to near homogeneity. Both the native and the recombinant proteins were immunorecognized by antibodies raised against pea PR-10 proteins, and exhibited a ribonucleolytic activity against several RNA preparations, including lupin root total RNA. Characterization of its enzymatic properties indicates that the LaPR-10 protein belongs to the class II ribonucleases. We present evidence that the white lupin 17 kDa protein is constitutively expressed during all stages of root development and, to a lesser extent, in other plant parts. In addition, we demonstrate the presence, in the LaPR-10 amino acid sequence, of a number of motifs that are common to most PR-10 proteins, as well as a RGD motif that is shared only with the alfalfa SRG1 sequence.

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References

  • Aitken, A. 1990. Identification of Protein Consensus Sequences: Active Site Motifs, Phosphorylation, and Other Post-Translation Modifications, E. Harwood, New York.

    Google Scholar 

  • Allen, R.C. 1994. Gel Electrophoresis of Proteins and Nucleic Acids, W. de Gruyter, New York.

    Google Scholar 

  • Antinov, J.F., Ritter, C.E., Pierpoint, W.S. and van Loon, N.C. 1980. Comparison of three pathogenesis-related proteins from plants of two cultivars of tobacco infected with TMV. J. Gen. Virol. 47: 79–87.

    Google Scholar 

  • Attucci, S., Aitken, S., Gulick, P.J. and Ibrahim, R.K. 1995. Farnesyl pyrophosphate synthase from white lupin: molecular cloning, expression and purification of the expressed protein. Arch. Biochem. Biophys. 321: 493–500.

    Google Scholar 

  • Bantignies, B., Gulick, P.J. and Ibrahim, R.K. 1998. Pathogenesisrelated protein PR-10 from white lupin. (Sequence anouncement.) Plant Mol. Biol. 36: 329.

    Google Scholar 

  • Bariola, P.A. and Green, P.J. 1997. Ribonucleases. In: G. D'Alessio and J.F. Riordan (Eds.) Plant Ribonucleases: Structure and Function, Academic Press, New York, pp. 63–190.

    Google Scholar 

  • Bause, E. 1983. Structure requirements of N-glycosylation of proteins. Biochem. J. 209: 331–336.

    Google Scholar 

  • Boller, T. 1987. Antimicrobial functions of plant hydrolases, chitinase and β-1,3-glucanase. In: B. Fritig and M. Legrand (Eds.), Developments in Plant Pathology, Vol. 2, Kluwer Academic Publishers, Dordrecht, Netherlands, pp. 391–400.

    Google Scholar 

  • Borgese, N., Aggujaro, D., Carrera, P., Pietrini, G. and Bassetti, M. 1996. A role for N-myristoylation in protein targeting: NADHcytochrome b5 reductase requires myristic acid for association with outer mitochondrial but not ER membranes. J. Cell Biol. 135: 1501–1513.

    Google Scholar 

  • Breda, C., Sallaud, C., El-Turk, J., Buffard, D., de Kozak, I., Esnault, R. and Kondorosi, A. 1996. Defense reaction in Medicago sativa: a gene encoding a class 10 PR protein is expressed in vascular bundles. Mol. Plant-Microbe Interact. 9: 713–719.

    Google Scholar 

  • Breiteneder, H., Pettenburger, K., Bito, A., Valenta, R., Kraft, D., Rumpold, H., Scheiner, O. and Breitenbach, M. 1989. The gene coding for the major birch pollen allergen Betv 1 is highly homologous to a pea disease resistance response gene. EMBO J. 8: 1935–1938.

    Google Scholar 

  • Breiteneder, H., Ferreira, F., Hoffmann-Sommergrube, K., Ebner, C., Breitenbach, M., Rumpold, H., Kraft, D. and Scheiner, O. 1993. Four recombinant isoforms of Cora a 1, the major allergen of hazel pollen, show different IgE-binding properties. Eur. J. Biochem; 212: 355–362.

    Google Scholar 

  • Bufe, A., Spangfort, M.D., Kahlert, H., Schlaak, M. and Becker, W.M. 1996. The major birch pollen allergen, Betv1, shows ribonuclease activity. Planta 199: 413–415.

    Google Scholar 

  • Carr, J.P. and Klessig, D.F. 1989. The pathogenesis related proteins of plants. In: J.K. Setlow (Ed.), Genetic Engineering: Principles and Methods, Vol 11, Plenum Press, New York, pp. 65–109.

    Google Scholar 

  • Crowell, D.N., Maliyakal, E.J., Russell, D. and Amasino, R.M. 1992. Characterization of a stress-induced, developmentally regulated gene family from soybean. Plant Mol. Biol. 18: 459–466.

    Google Scholar 

  • Dellaporta, S.L., Wood, J. and Hicks, J.B. 1983. A plant DNA minipreparation, version 2. Plant Mol. Biol. Rep. 1: 19–22.

    Google Scholar 

  • Fristensky, B., Horovitz, D. and Hadwiger, L.A. 1988. cDNA sequences for pea disease resistance genes. Plant Mol. Biol. 11: 713–715.

    Google Scholar 

  • Gajhede, M., Osmark, K., Poulsen, F.M., Ipsen, H., Larsen, J.N., Joost van Neerven, P.J., Schou, C., Løwenstein, H. and Spangfort, M.D. 1996. X-ray and NMR structure of Betv 1, the origin of birch pollen allergy. Nature Struct. Biol. 3: 1040–1045.

    Google Scholar 

  • Hahlbrock, K. and Scheel, D. 1989. Physiology and molecular biology of phenylpropanoid metabolism. Annu. Rev. Plant Physiol. Plant Mol. Biol. 40: 347–369.

    Google Scholar 

  • Hewick, R.M., Hunkapiller, M.W., Hood, L.E. and Dreyer, W.J. 1981. A gas-liquid solid phase peptide and protein sequenator. J. Biol. Chem. 256: 7990–7997.

    Google Scholar 

  • Hill, G.D. 1977. The composition and nutritive value of lupin seed. Nutr. Abstr. Rev. 47: 511–529.

    Google Scholar 

  • Hofsteenge, J. 1977. Ribonuclease inhibitors. In: G. D'Alessio and J.F. Riordan (Eds.), Ribonucleases: Structure and Function, Academic Press, New York, pp. 621–658.

    Google Scholar 

  • Huang, J.C., Chang, F.C. and Wang, C.S. 1997. Characterization of a lily tapetal transcript that shares sequence similarity with a class of intracellular pathogenesis-related (IPR) proteins. Plant Mol. Biol. 34: 681–686.

    Google Scholar 

  • Itturriaga, E.A., Leech, M.J., Barratt, D.H. and Wang, T.L. 1994. Two ABA-responsive proteins from pea (Pisum sativum L.) are closely related to intracellular pathogenesis-related proteins. Plant Mol. Biol. 24: 235–240.

    Google Scholar 

  • Laemmli, U.K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680.

    Google Scholar 

  • Matsudaira, P. 1987. Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes. J. Biol. Chem. 262: 10035–10038.

    Google Scholar 

  • Matton, D.P. and Brisson, N. 1989. Cloning, expression and sequence conservation of pathogenesis-related gene transcripts of potato. Mol. Plant-Microbe Interact. 2: 325–331.

    Google Scholar 

  • Midoh, H. and Iwata, M. 1996. Cloning and characterization of a probenazole-inducible gene for an intracellular pathogenesisrelated protein in rice. Plant Cell Physiol. 37: 9–18.

    Google Scholar 

  • Moiseyev, G.P., Beintema, J.J., Fedoreyeva, L.I. and Yakovlev, G.E. 1994. High sequence similarity between a ribonuclease from ginseng calluses and fungus-elicited proteins from parsley indicates that intracellular pathogenesis-related proteins are ribonucleases. Planta 193: 470–472.

    Google Scholar 

  • Moiseyev, G.P., Fedoreyeva, L.I., Zhuravlev, Y.N., Yasnetskaya, E., Jekel, P.A. and Beintema, J.J. 1997. Primary structures of two ribonucleases from ginseng calluses. New members of the PR-10 family of intracellular pathogenesis-related plant proteins. FEBS Lett. 407: 207–210.

    Google Scholar 

  • Mylona, P., Moerman, M., Yang, W.C., Gloudemans, T., Van De Kerckhove, J., van Kammen, A., Bisseling, T. and Franssen, H.J. 1994. The root epidermis-specific pea gene RH2 is homologous to a pathogenesis-related gene. Plant Mol. Biol. 26: 39–50.

    Google Scholar 

  • Pless, D.D. and Lennarz, W.J. 1977. Enzymatic conversion of proteins to glycoproteins. Proc. Natl. Acad. Sci. USA 74: 134–138.

    Google Scholar 

  • Ruoslahti, E. and Pierschbacher, M.D. 1987. New perspectives in cell adhesion: RDG and integrins. Science 238: 491–497.

    Google Scholar 

  • Sambrook, J., Fritsch, E.F. and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.

    Google Scholar 

  • Saraste, M., Sibbald, P.R. and Wittinghofer, A. 1990. The P-loop: a common motif in ATP-and GTP-binding proteins. Trends Biol. Sci. 15: 430–434.

    Google Scholar 

  • Sirkorski, M.M., Szlagowska, A.E. and Legocki, A.B. 1995. cDNA sequences encoding for two homologues of Lupinus luteus (L.) IPR-like proteins (Accession No. X79974 and X79975 for LIR18A and LIR18B mRNAs respectively). Plant Physiol. 110: 335–338.

    Google Scholar 

  • Sirkorski, M.M., Szlagowska, A.E. and Legocki, A.B. 1998. Structure of Lupinus luteus genes YPR-10.1a and YPR-10.1b encoding two homologous pathogenesis-related proteins of PR-10 class. Plant Physiol. 116: 1192–1195.

    Google Scholar 

  • Smit, G., Logman, T.J.J., Boerrigter, M.E.T., Kijne, J.W. and Lugtenberg, B.J.J. 1989. Purification and partial characterization of the Rhizobium leguminosarum biovar viciae Ca2+-dependent adhesin which mediates the first step in attachement of cells of the family Rhizobiaceae to plant root hair tips. J. Bact. 171: 4054–4062.

    Google Scholar 

  • Sommer-Knudsen, J., Bacic, A. and Clarke, A.E. 1988. Hydroxyproline-rich glycoproteins. Phytochemistry 47: 483–497.

    Google Scholar 

  • Somssich, I.E., Schmelzer, E., Kawalleck, P. and Hahlbrock, K. 1988. Gene structure and in situ transcript localization of pathogenesis-related protein 1 in parsley. Mol. Gen. Genet. 213: 93–98.

    Google Scholar 

  • Stinz, A., Heitz, T., Prasad, V., Wiedemann-Merdinogen, S., Kauffmann, S., Geofroy, P., Legrand, M. and Fritig, B. 1993. Plant pathogenesis-related proteins and their role in defense against pathogens. Biochimie 75: 687–706.

    Google Scholar 

  • Swart, S., Logman, T.J.J., Smit, G., Lugtenberg, B.J.J. and Kijne, J.W. 1994. Purification and partial characterization of a glycoprotein from pea with receptor activity for rhicadhesin, an attachment protein for Rhizobiacceae. Plant Mol. Biol. 24: 171–183.

    Google Scholar 

  • Swoboda, I., Hoffmann-Sommergruber, K., O'Ríordáin, G., Scheiner, O., Heberle-Bors, E. and Vincente, O. 1996. Betv1 proteins, the major birch pollen allergens and members of a family of conserved pathogenesis-related proteins, show ribonuclease activity in vitro. Physiol. Plant. 96: 433–438.

    Google Scholar 

  • Truesdell, G.M. and Dickman, M.B. 1997. Isolation of pathogen/stress-inducible cDNAs from alfalfa by mRNA differential display. Plant Mol. Biol. 33: 737–743.

    Google Scholar 

  • Vaandrager, A.B., Ehlert, E.M.E., Jarchau, T. and Lohmann, S.M. 1996. N-terminal myristoylation is required for membrane localization of cGMP-dependent protein kinase type II. J. Biol. Chem. 271: 7025–7029.

    Google Scholar 

  • Vanek-Krebitz, M., Hoffmann-Sommergruber, K., Laimer, D., Camara, M., Susani, M., Ebner, C., Kraft, D., Scheiner, O. and Breiteneder. H. 1995. Cloning and sequencing of Mald 1, the major allergen from apple (Malus domestica), and its immunological relationship to Betv 1, the major birch pollen allergen. Biochem. Biophys. Res. Commun. 214: 538–551.

    Google Scholar 

  • van Loon, L.C., Pierpoint, W.S., Boller, T. and Conejero, V. 1994. Recommendations for naming plant pathogenesis-related proteins. Plant Mol. Biol. Rep. 12: 245–264.

    Google Scholar 

  • Water, M.H., Liu, J.W., Grand, C., Lamb, C.J. and Hess, D. 1990. Bean pathogenesis-related (PR) proteins deduced from elicitor-induced transcripts are members of a ubiquitous new class of proteins including pollen allergens. Mol. Gen. Genet. 222: 353–360.

    Google Scholar 

  • Walter, M.H., Liu, J.W., Wünn, J. and Hess, D. 1996. Bean ribonuclease-like pathogenesis-related protein genes (YPR-10) display complex patterns of developmental, dark-induced and exogenous stimulus-dependent expression. Eur. J. Biochem. 239: 281–293.

    Google Scholar 

  • Warner, S.A.J., Scott, R. and Draper, J. 1992. Characterization of a wound-induced transcript from the monocot asparagus that shares similarity with a class of intracellular pathogenesis-related (PR) proteins. Plant Mol. Biol. 19: 555–561.

    Google Scholar 

  • Wessel, D. and Flügge, U.I. 1984. A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids. Anal. Biochem. 138: 141–143.

    Google Scholar 

  • Yen, Y., and Green, P.J. 1991. Identification and properties of the major ribonucleases of Arabidopsis thaliana. Plant Physiol. 97: 1487–1493.

    Google Scholar 

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Bantignies, B., Séguin, J., Muzac, I. et al. Direct evidence for ribonucleolytic activity of a PR-10-like protein from white lupin roots. Plant Mol Biol 42, 871–881 (2000). https://doi.org/10.1023/A:1006475303115

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