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Sequence specificity of methylation in higher plant DNA

Abstract

Although plant DNA has a high content of 5-methylcytosine (5mC1) very little is known about the distribution of this modification. Many of these methylations are found in the dinucleotide sequence C-G (refs 2–5) which is also the major modified site in animal cell DNA. It is clear, however, that C-G methylation cannot account for all the 5mC in DNA, in which this modified base may represent over 30% of the cytosine residues (as in certain varieties of plant1). It was this observation that prompted the search for other methylated sites in the DNA. The results presented here show that methylated cytosine is indeed present at a variety of cytosine-containing dinucleotides, all of which, however, are part of the basic trinucleotide C-X-G. This sequence is probably essential for modification as it provides the symmetrical cytosines necessary for ensuring the inheritance of methylation at these sites.

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References

  1. Shapiro, H. S. CRC Handbk Biochem. molec. Biol. 2, 259 (1976).

    Google Scholar 

  2. Bonen, L., Huh, T. Y. & Gray, T. W. FEBS Lett. 111, 340–346 (1980).

    Article  CAS  Google Scholar 

  3. Burton, W. G., Grabowy, C. T. & Sager, R. Proc. natn. Acad. Sci. U.S.A. 76, 1390–1394 (1979).

    Article  ADS  CAS  Google Scholar 

  4. Royer, H. D. & Sager, R. Proc. natn. Acad. Sci. U.S.A. 76, 5794–5798 (1979).

    Article  ADS  CAS  Google Scholar 

  5. Deumling, B. Proc. natn. Acad. Sci. U.S.A. 78, 338–342 (1981).

    Article  ADS  CAS  Google Scholar 

  6. Gruenbaum, Y., Stein, R., Cedar, H. & Razin, A. FEBS Lett. 124, 67–71 (1981).

    Article  CAS  Google Scholar 

  7. Setlow, P. CRC Handbk Biochem. molec. Biol. 2, 312–318 (1976).

    Google Scholar 

  8. Bird, A. P. & Southern, E. M. J. molec. Biol. 118, 27–48 (1978).

    Article  CAS  Google Scholar 

  9. Cedar, H., Solage, A., Glaser, G. & Razin, A. Nucleic Acids Res. 6, 2125–2132 (1979).

    Article  CAS  Google Scholar 

  10. Gruenbaum, Y., Cedar, H. & Razin, A. Nucleic Acids Res. 9, 2509–2515 (1981).

    Article  CAS  Google Scholar 

  11. Razin, A. & Riggs, A. D. Science 210, 604–610 (1980).

    Article  ADS  CAS  Google Scholar 

  12. Bird, A. P. J. molec. Biol. 118, 46–60 (1978).

    Article  Google Scholar 

  13. Riggs, A. D. Cytogenet. cell. Genet. 14, 9–14 (1975).

    Article  CAS  Google Scholar 

  14. Holliday, R. & Pugh, J. E. Science 187, 226–232 (1975).

    Article  ADS  CAS  Google Scholar 

  15. Razin, A. & Friedman, J. Prog. Nucleic Acids Res. molec. Biol 25, 33–52 (1981).

    Article  CAS  Google Scholar 

  16. Pollack, Y., Stein, R., Razin, A. & Cedar, H. Proc. natn. Acad. Sci. U.S.A. 77, 6463–6467 (1980).

    Article  ADS  CAS  Google Scholar 

  17. Wigler, M., Levy, D. & Perucho, M. Cell 24, 33–40 (1981).

    Article  CAS  Google Scholar 

  18. van der Ploeg, L. H. T. & Flavel, R. A. Cell 19, 947–958 (1980).

    Article  CAS  Google Scholar 

  19. van der Ploeg, L. H. T., Groffen, J. & Flavell, R. A. Nucleic Acids Res. 20, 4563–4574 (1980).

    Article  Google Scholar 

  20. Naveh, T. & Cedar, H. Proc. natn. Acad. Sci. U.S.A. (in the press).

  21. Sneider, W. T. Nucleic Acids Res. 8, 3829–3840 (1980).

    Article  CAS  Google Scholar 

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Gruenbaum, Y., Naveh-Many, T., Cedar, H. et al. Sequence specificity of methylation in higher plant DNA. Nature 292, 860–862 (1981). https://doi.org/10.1038/292860a0

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