Proposal to elevate Mycobacterium avium complex ITS sequevar MAC-Q to Mycobacterium vulneris sp. nov.

References

1. Adékambi, T., Colson, P. & Drancourt, M.(2003).rpoB-based identification of nonpigmented and late-pigmenting rapidly growing mycobacteria. J Clin Microbiol 41, 5699–5708.[CrossRef] [Google Scholar]
2. CDC(1996).Standardized Method for HPLC Identification of Mycobacteria. Atlanta, USA: Department of Health and Human Services, Centers for Disease Control and Prevention.
3. Frothingham, R. & Wilson, K. H.(1993). Sequence-based differentiation of strains in the Mycobacterium avium complex. J Bacteriol 175, 2818–2825. [Google Scholar]
4. Griffith, D. E., Aksamit, T., Brown-Elliot, B. A., Catanzaro, A., Daley, C., Gordin, F., Holland, S. M., Horsburgh, R., Huitt, G. & other authors(2007). An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med 175, 367–416.[CrossRef] [Google Scholar]
5. Guerrero, C., Bernasconi, C., Burki, D., Bodmer, T. & Telenti, A.(1995). A novel insertion element from Mycobacterium avium, IS1245, is a specific target for analysis of strain relatedness. J Clin Microbiol 33, 304–307. [Google Scholar]
6. Kent, P. T. & Kubica, G. P.(1985).Public Health Mycobacteriology. A Guide For The Level III Laboratory. Atlanta, USA: Department of Health and Human Services.
7. Mijs, W., de Haas, P., Rossau, R., van der Laan, T., Rigouts, L., Portaels, F. & van Soolingen, D.(2002). Molecular evidence to support a proposal to reserve the designation Mycobacterium avium subsp. avium for bird-type isolates and ‘M. avium subsp. hominissuis’ for the human/porcine type of M. avium. Int J Syst Evol Microbiol 52, 1505–1518.[CrossRef] [Google Scholar]
8. Murcia, M. I., Tortoli, E., Menendez, M. C., Palenque, E. & Garcia, M. J.(2006).Mycobacterium colombiense sp. nov., a novel member of the Mycobacterium avium complex and description of MAC-X as a new ITS genetic variant. Int J Syst Evol Microbiol 56, 2049–2054.[CrossRef] [Google Scholar]
9. Roth, A., Fischer, M., Hamid, M. E., Michalke, S., Ludwig, W. & Mauch, H.(1998). Differentiation of phylogenetically related slowly growing mycobacteria based on 16S–23S rRNA gene internal transcribed spacer sequences. J Clin Microbiol 36, 139–147. [Google Scholar]
10. Springer, B., Stockman, L., Teschner, K., Roberts, G. D. & Böttger, E. C.(1996). Two-laboratory collaborative study on identification of mycobacteria: molecular versus phenotypic methods. J Clin Microbiol 34, 296–303. [Google Scholar]
11. Stackebrandt, E., Frederiksen, W., Garrity, G. M., Grimont, P. A., Kämpfer, P., Maiden, M. C., Nesme, X., Rosselló-Mora, R., Swings, J. & other authors(2002). Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int J Syst Evol Microbiol 52, 1043–1047.[CrossRef] [Google Scholar]
12. Tamura, K., Dudley, J., Nei, M. & Kumar, S.(2007). MEGA4: Molecular Evolutionary Genetics Analysis (mega) software version 4.0. Mol Biol Evol 24, 1596–1599.[CrossRef] [Google Scholar]
13. Telenti, A., Marchesi, F., Balz, M., Bally, F., Böttger, E. C. & Bodmer, T.(1993). Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. J Clin Microbiol 31, 175–178. [Google Scholar]
14. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G.(1997). The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876–4882.[CrossRef] [Google Scholar]
15. Tortoli, E., Rindi, L., Garcia, M. J., Chiaradonna, P., Dei, R., Garzelli, C., Kroppenstedt, R. M., Lari, N., Mattei, R. & other authors(2004). Proposal to elevate the genetic variant MAC-A, included in the Mycobacterium avium complex, to species rank as Mycobacterium chimaera sp. nov. Int J Syst Evol Microbiol 54, 1277–1285.[CrossRef] [Google Scholar]
16. van Klingeren, B., Dessens-Kroon, M., van der Laan, T., Kremer, K. & van Soolingen, D.(2007). Drug susceptibility testing of Mycobacterium tuberculosis complex using a high throughput, reproducible, absolute concentration method. J Clin Microbiol 45, 2662–2668.[CrossRef] [Google Scholar]
17. Wayne, L. G. & Sramek, H. A.(1992). Agents of newly recognized or infrequently encountered mycobacterial diseases. Clin Microbiol Rev 5, 1–25. [Google Scholar]
18. Wayne, L. G., Good, R. C., Böttger, E. C., Butler, R., Dorsch, M., Ezaki, T., Gross, W., Jonas, V., Kilburn, J. & other authors(1996). Semantide- and chemotaxonomy-based analyses of some problematic phenotypic clusters of slowly growing mycobacteria, a cooperative study of the International Working Group on Mycobacterial Taxonomy. Int J Syst Bacteriol 46, 280–297.[CrossRef] [Google Scholar]