SAGEmap: A Public Gene Expression Resource

  1. Alex E. Lash1,4,
  2. Carolyn M. Tolstoshev1,
  3. Lukas Wagner1,
  4. Gregory D. Schuler1,
  5. Robert L. Strausberg2,
  6. Gregory J. Riggins3, and
  7. Stephen F. Altschul1
  1. 1National Center for Biotechnology Information, National Institutes of Health, Bethesda, Maryland 20894 USA; 2National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20894 USA; 3Department of Pathology, Duke University Medical Center, Durham, North Carolina 27710 USA

Abstract

We have constructed a public gene expression data repository and online data access and analysis, WWW and FTP sites for serial analysis of gene expression (SAGE) data. The WWW and FTP components of this resource, SAGEmap, are located at http://www.ncbi.nlm.nih.gov/sage andftp://ncbi.nlm.nih.gov/pub/sage, respectively. We herein describe SAGE data submission procedures, the construction and characteristics of SAGE tags to gene assignments, the derivation and use of a novel statistical test designed specifically for differential-type analyses of SAGE data, and the organization and use of this resource.

Footnotes

  • 4 Corresponding author.

  • E-MAIL alash{at}ncbi.nlm.nih.gov; FAX (301) 480-9241.

    • Received October 12, 1999.
    • Accepted May 1, 2000.
| Table of Contents

Preprint Server