Evolution and Comparative Genomics of Odorant- and Pheromone-Associated Genes in Rodents
Abstract
Chemical cues influence a range of behavioral responses in rodents. The involvement of protein odorants and odorant receptors in mediating reproductive behavior, foraging, and predator avoidance suggests that their genes may have been subject to adaptive evolution. We have estimated the consequences of selection on rodent pheromones, their receptors, and olfactory receptors. These families were chosen on the basis of multiple gene duplications since the common ancestor of rat and mouse. For each family, codons were identified that are likely to have been subject to adaptive evolution. The majority of such sites are situated on the solvent-accessible surfaces of putative pheromones and the lumenal portions of their likely receptors. We predict that these contribute to physicochemical and functional diversity within pheromone-receptor interaction sites.
Footnotes
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[Supplemental material is available online at www.genome.org.]
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Article and publication are at http://www.genome.org/cgi/doi/10.1101/gr.1940604.
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↵1 These authors contributed equally to this work.
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↵2 Present address: Division of Immunity & Infection, University of Birmingham. Birmingham, B15 2TT, UK.
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↵3 Corresponding author. E-MAIL Chris.Ponting{at}anat.ox.ac.uk; FAX 44 (0)1865 272420.
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- Accepted November 17, 2003.
- Received September 5, 2003.
- Cold Spring Harbor Laboratory Press
