organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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ISSN: 2056-9890

(20S*,24S*)-25-Hy­dr­oxy-20,24-ep­­oxy-A-homo-4-oxadammaran-3-one (Chrysura) isolated from the leaves of Walsura chrysogyne

aDepartment of Chemistry, Faculty of Science, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia
*Correspondence e-mail: intan@science.upm.edu.my

(Received 21 October 2011; accepted 9 November 2011; online 12 November 2011)

The title dammarane triterpenoid, C30H50O4, assigned the name chrysura, was isolated from an ethyl acetate extract of Walsura chrysogyne leaves (Meliaceae). It has 20S*,24S* relative stereochemistry and an oxepanone ring with two methyl groups at position 4. The two cyclo­hexane rings adopt chair conformations. The cyclo­pentane and tetra­hydro­furan rings have envelope conformations; their mean planes make a dihedral angle of 13.1 (3)°, indicating that the rings are only slightly tilted with respect to each other. There is an intra­molecular C—H⋯O hydrogen bond in the mol­ecule, which forms S(6) and S(7) ring motifs. In the crystal, mol­ecules are linked via O—H⋯O and C—H⋯O hydrogen bonds, forming chains propagating along [001] which stack along the b-axis direction.

Related literature

For related structures, see: Pan et al. (2010[Pan, L., Kardono, L. B. S., Riswan, S., Chai, H., Carcache de Blanco, E. J., Pannell, C. M., Soejart, D. D., McCloud, T. G., Newman, D. J. & Kinghorn, A. D. (2010). J. Nat. Prod. 73, 1873-1878.]). For graph-set analysis, see: Bernstein et al. (1995[Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555-1573.]). For the biological activity of related compounds, see: Burkill (1966[Burkill, L. H. (1966). A Dictionary of Economics Products of The Malay Peninsula, Vols. I and II. Kuala Lumpur: Ministry of Agriculture and Cooperatives.]); Hegnauer (1990[Hegnauer, R. (1990). Editor. Chemotaxonomie der Planzen, Vol. IX. Basel and Stuttgart: Birkhauser Verlag.]); Fujiwara et al. (1982[Fujiwara, T., Takeda, T., Ogihara, Y., Shimizu, M., Nomura, T. & Tomita, Y. (1982). Chem. Pharm. Bull. 30, 4025-4030.]).

[Scheme 1]

Experimental

Crystal data
  • C30H50O4

  • Mr = 474.70

  • Orthorhombic, P 21 21 21

  • a = 6.9881 (1) Å

  • b = 11.0108 (2) Å

  • c = 34.9733 (7) Å

  • V = 2691.01 (8) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 0.59 mm−1

  • T = 100 K

  • 0.40 × 0.08 × 0.07 mm

Data collection
  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009[Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.]) Tmin = 0.801, Tmax = 0.960

  • 48305 measured reflections

  • 5058 independent reflections

  • 5040 reflections with I > 2σ(I)

  • Rint = 0.045

Refinement
  • R[F2 > 2σ(F2)] = 0.092

  • wR(F2) = 0.233

  • S = 1.21

  • 5058 reflections

  • 316 parameters

  • H-atom parameters constrained

  • Δρmax = 0.47 e Å−3

  • Δρmin = −0.38 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
C19—H19A⋯O32 0.96 2.44 3.082 (6) 124
O34—H34A⋯O32i 0.82 2.20 3.010 (5) 170
C26—H26A⋯O31i 0.96 2.53 3.392 (7) 150
Symmetry code: (i) [-x+{\script{1\over 2}}, -y+2, z-{\script{1\over 2}}].

Data collection: APEX2 (Bruker, 2009[Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.]); cell refinement: SAINT (Bruker, 2009[Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.]); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: Mercury (Macrae et al., 2006[Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453-457.]); software used to prepare material for publication: SHELXL97.

Supporting information


Comment top

Meliaceae or Mahogany is a plant family, in the order of Sapindales, which consists of flowering plants of mostly trees, shrubs and a few herbaceous plants (Burkill, 1966). This family is noted for the wide range of compounds of different classes of which it is compossed, for example, terpenoids (triterpenoids, monoterpenes, sesquiterpenes, limonoids), saponins, alkaloids, polyphenols, quinines, fatty and hydroxyl acids (Hegnauer, 1990). Among these groups of constituents, some are responsible for biological activities such as antiviral, anthelmintic, antitumor, anti-inflammatory and anti-rheumatic, which have been scientifically proven (Fujiwara et al., 1982). Walsura chrysogyne is a Meliaceae species which is among the least explored of higher plants.

The title dammarane triterpenoid, namely chrysura (1), has been isolated for the first time from the ethyl acetate extract of the leaves of Walsura chrysogyne (Meliaceae). Recently, the same compound was reported to have been obtained from Aglaia foveolata, but in resin form (compound 5 in reference Pan et al., 2010). They determined its relative stereochemistry by Nuclear Magnetic Resonance (NMR) spectroscopy. Herein, we describe the crystal structure of the title compound, chrysura (1), whose relative configuration was also obtained by two-dimensional NMR spectroscopy. By a close comparison of the 13C NMR signals at C-20, C-21, C-22, C-23 and C-24 reported for compound 5 (δ 86.5, 27.2, 34.8, 26.3 and 86.4; Pan et al., 2010) and those obtained for the title compound, chrysura (1) (δ 86.5, 27.2, 35.0, 26.4 and 86.5), it was shown that these two compounds are identical. This is substantiated by the 1H NMR signal at H-24 of chrysura (1), which is a doublet of doublet with J values of 10 and 5.5 Hz, comparable to the values observed for compound 5, that is 9.9 and 5.6 Hz. Hence, the relative configuration at C20 and C24 of chrysura (1), was determined by NMR to be the same as that of compound 5 [Pan et al., 2010].

The molecular structure of the title molecule, chrysura (1), is shown in Fig. 1. The two cyclohexane rings, B (C5-C10) and C (C8,C9,C11-C14), adopt chair conformations. The cyclopentane ring D (C13-C17) and the tetrahydrofuran ring E (O33,C20, C22-C24) have envelope conformations, with atoms C14 and C23 at the flap of rings D and E, respectively. The mean planes through rings D and E make a dihedral angle of 13.1 (3)°, indicating that they are only slightly twisted with respect to each other. As shown in Fig. 1, the structure of the molecule is stabilized by an intramolecular C—H···O hydrogen bond (Table 1), which forms S(6) and S(7) ring motifs (Bernstein et al., 1995).

In the crystal of chrysura (1), molecules are linked via intermolecular O—H···O and C—H···O hydrogen bonds (Table 1), forming chains propagating along [001]. These chains stack along the b-axis, as shown in Fig. 2.

Hence, in the title compound, chrysura (1), the relative configurations at C20 and C24 of the epoxy unit (ring E) have been confirmed to be S-methyl configurations.

Related literature top

For related structures, see: Pan et al. (2010). For graph-set analysis, see: Bernstein et al. (1995). For the biological activity of related compounds, see: Burkill (1966); Hegnauer (1990); Fujiwara et al. (1982).

Experimental top

The air-dried ground leaves of Walsura chrysogyne (8.94 kg) collected at Pasir Raja, Terengganu, Malaysia, were macerated in methanol at room temperature (3 × 1000 ml). The crude extract (230 g) was partitioned into hexane (12.2 g), ethyl acetate (EtOAc; 16.6 g), and water (16.8 g). A portion (9.0 g) of the EtOAc extract was further fractionated by using vacuum column chromatography on silica gel normal phase (7.5 × 20 cm) eluted with CHCl3, and CHCl3—MeOH in 10% increasing amounts of MeOH. Fraction MeOH-CHCl3 [9:1] (2.0 g) was subjected to another column chromatography on Sephadex LH-20 (2 × 30 cm) with CHCl3–MeOH (9:1) to yield four fractions. The fraction obtained by hexane-EtOAc [7:3] (85.3 mg) was further purified on silica gel normal phase (1 × 20 cm) eluted with hexane-acetone (9:1) to afford the title compound (134.8 mg, 0.059%). Colourless needle-shaped crystals of the title compound, suitable for X-ray diffraction analysis, were recrystallized from ethyl aceate-acetone. The 1H- and 13C-NMR spectral data were consistent with those reported by (Pan et al., 2010).

Refinement top

All the H atoms were positioned geometrically and refined using a riding model: O—H = 0.82 Å and C—H = 0.93 – 0.98 Å with Uiso~(H) = 1.5Ueq(O, Cmethyl), and = 1.2Ueq(C) for all other C-bound H atoms. A rotating-group model was applied for the methyl groups. The anomalous dispersion effects of the atoms in the molecule are not sufficient to determine the absolute structure of the molecule in the crystal [Flack parameter = 0.1 (5)].

Structure description top

Meliaceae or Mahogany is a plant family, in the order of Sapindales, which consists of flowering plants of mostly trees, shrubs and a few herbaceous plants (Burkill, 1966). This family is noted for the wide range of compounds of different classes of which it is compossed, for example, terpenoids (triterpenoids, monoterpenes, sesquiterpenes, limonoids), saponins, alkaloids, polyphenols, quinines, fatty and hydroxyl acids (Hegnauer, 1990). Among these groups of constituents, some are responsible for biological activities such as antiviral, anthelmintic, antitumor, anti-inflammatory and anti-rheumatic, which have been scientifically proven (Fujiwara et al., 1982). Walsura chrysogyne is a Meliaceae species which is among the least explored of higher plants.

The title dammarane triterpenoid, namely chrysura (1), has been isolated for the first time from the ethyl acetate extract of the leaves of Walsura chrysogyne (Meliaceae). Recently, the same compound was reported to have been obtained from Aglaia foveolata, but in resin form (compound 5 in reference Pan et al., 2010). They determined its relative stereochemistry by Nuclear Magnetic Resonance (NMR) spectroscopy. Herein, we describe the crystal structure of the title compound, chrysura (1), whose relative configuration was also obtained by two-dimensional NMR spectroscopy. By a close comparison of the 13C NMR signals at C-20, C-21, C-22, C-23 and C-24 reported for compound 5 (δ 86.5, 27.2, 34.8, 26.3 and 86.4; Pan et al., 2010) and those obtained for the title compound, chrysura (1) (δ 86.5, 27.2, 35.0, 26.4 and 86.5), it was shown that these two compounds are identical. This is substantiated by the 1H NMR signal at H-24 of chrysura (1), which is a doublet of doublet with J values of 10 and 5.5 Hz, comparable to the values observed for compound 5, that is 9.9 and 5.6 Hz. Hence, the relative configuration at C20 and C24 of chrysura (1), was determined by NMR to be the same as that of compound 5 [Pan et al., 2010].

The molecular structure of the title molecule, chrysura (1), is shown in Fig. 1. The two cyclohexane rings, B (C5-C10) and C (C8,C9,C11-C14), adopt chair conformations. The cyclopentane ring D (C13-C17) and the tetrahydrofuran ring E (O33,C20, C22-C24) have envelope conformations, with atoms C14 and C23 at the flap of rings D and E, respectively. The mean planes through rings D and E make a dihedral angle of 13.1 (3)°, indicating that they are only slightly twisted with respect to each other. As shown in Fig. 1, the structure of the molecule is stabilized by an intramolecular C—H···O hydrogen bond (Table 1), which forms S(6) and S(7) ring motifs (Bernstein et al., 1995).

In the crystal of chrysura (1), molecules are linked via intermolecular O—H···O and C—H···O hydrogen bonds (Table 1), forming chains propagating along [001]. These chains stack along the b-axis, as shown in Fig. 2.

Hence, in the title compound, chrysura (1), the relative configurations at C20 and C24 of the epoxy unit (ring E) have been confirmed to be S-methyl configurations.

For related structures, see: Pan et al. (2010). For graph-set analysis, see: Bernstein et al. (1995). For the biological activity of related compounds, see: Burkill (1966); Hegnauer (1990); Fujiwara et al. (1982).

Computing details top

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title molecule, chrysura (1), showing 50% probability displacement ellipsoids and the atom-numbering scheme. The intramolecular C-H···O hydrogen bond is shown as a dashed red line.
[Figure 2] Fig. 2. The crystal packing of the title compound, chrysura (1), viewed along the a axis, showing the formation of the hydrogen bonded chains (see Table 1 for details). H atoms not involved in the hydrogen bonds (dashed lines) have been omitted for clarity.
(20S*,24S*)-25-Hydroxy-20,24-epoxy-A-homo-4-oxadammaran- 3-one top
Crystal data top
C30H50O4F(000) = 1048
Mr = 474.70Dx = 1.172 Mg m3
Orthorhombic, P212121Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2ac 2abCell parameters from 9811 reflections
a = 6.9881 (1) Åθ = 3–69°
b = 11.0108 (2) ŵ = 0.59 mm1
c = 34.9733 (7) ÅT = 100 K
V = 2691.01 (8) Å3Needle, colourless
Z = 40.40 × 0.08 × 0.07 mm
Data collection top
Bruker APEXII CCD
diffractometer
5058 independent reflections
Radiation source: fine-focus sealed tube5040 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
φ and ω scansθmax = 69.9°, θmin = 2.5°
Absorption correction: multi-scan
(SADABS; Bruker, 2009)
h = 78
Tmin = 0.801, Tmax = 0.960k = 1313
48305 measured reflectionsl = 4142
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.092 w = 1/[σ2(Fo2) + (0.0677P)2 + 8.7996P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.233(Δ/σ)max < 0.001
S = 1.21Δρmax = 0.47 e Å3
5058 reflectionsΔρmin = 0.38 e Å3
316 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0021 (7)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack, H. D. (1983). Acta Cryst. A39, 876–881
Secondary atom site location: difference Fourier mapAbsolute structure parameter: 0.1 (5)
Crystal data top
C30H50O4V = 2691.01 (8) Å3
Mr = 474.70Z = 4
Orthorhombic, P212121Cu Kα radiation
a = 6.9881 (1) ŵ = 0.59 mm1
b = 11.0108 (2) ÅT = 100 K
c = 34.9733 (7) Å0.40 × 0.08 × 0.07 mm
Data collection top
Bruker APEXII CCD
diffractometer
5058 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2009)
5040 reflections with I > 2σ(I)
Tmin = 0.801, Tmax = 0.960Rint = 0.045
48305 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.092H-atom parameters constrained
wR(F2) = 0.233Δρmax = 0.47 e Å3
S = 1.21Δρmin = 0.38 e Å3
5058 reflectionsAbsolute structure: Flack, H. D. (1983). Acta Cryst. A39, 876–881
316 parametersAbsolute structure parameter: 0.1 (5)
0 restraints
Special details top

Experimental. The needle-shape crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O310.0510 (6)0.8536 (4)1.00267 (11)0.0404 (10)
O320.2497 (5)0.9976 (3)0.98533 (9)0.0275 (8)
O330.3411 (5)1.0371 (3)0.66313 (9)0.0277 (8)
O340.2551 (6)0.9264 (3)0.56801 (10)0.0345 (9)
H34A0.25930.95560.54640.052*
C10.1697 (7)0.8667 (4)0.90988 (13)0.0237 (10)
H1A0.03110.87080.91090.028*
H1B0.20300.81160.88930.028*
C20.2412 (9)0.8102 (5)0.94789 (14)0.0306 (12)
H2A0.19140.72840.95050.037*
H2B0.37990.80560.94770.037*
C30.1774 (8)0.8847 (5)0.98059 (13)0.0287 (12)
C40.4229 (7)1.0448 (5)0.96570 (13)0.0236 (10)
C50.4357 (7)1.0211 (4)0.92154 (13)0.0209 (10)
H5A0.51380.94780.91850.025*
C60.5520 (6)1.1256 (4)0.90319 (13)0.0203 (10)
H6A0.47821.20010.90460.024*
H6B0.66911.13760.91760.024*
C70.6018 (7)1.0995 (4)0.86170 (13)0.0204 (9)
H7A0.67521.02490.86030.024*
H7B0.68081.16480.85180.024*
C80.4216 (6)1.0873 (4)0.83692 (12)0.0183 (9)
C90.2945 (6)0.9860 (4)0.85516 (12)0.0165 (9)
H9A0.37070.91170.85290.020*
C100.2470 (7)0.9967 (4)0.89916 (12)0.0195 (9)
C110.1148 (6)0.9619 (4)0.83075 (13)0.0190 (9)
H11A0.03691.03480.83020.023*
H11B0.04000.89810.84260.023*
C120.1632 (7)0.9243 (4)0.78936 (13)0.0208 (10)
H12A0.22620.84580.78940.025*
H12B0.04630.91730.77460.025*
C130.2941 (7)1.0189 (4)0.77122 (12)0.0203 (10)
H13A0.22291.09560.77170.024*
C140.4758 (6)1.0405 (4)0.79509 (13)0.0167 (9)
C150.5831 (7)1.1312 (4)0.76941 (13)0.0235 (10)
H15A0.71891.13110.77510.028*
H15B0.53371.21280.77280.028*
C160.5460 (7)1.0854 (5)0.72793 (13)0.0217 (10)
H16A0.65481.03930.71870.026*
H16B0.52461.15350.71080.026*
C170.3625 (6)1.0024 (4)0.72988 (13)0.0191 (10)
H17A0.40590.91820.72740.023*
C300.5988 (7)0.9245 (4)0.79638 (13)0.0220 (10)
H30A0.63750.90320.77090.033*
H30B0.52540.85930.80720.033*
H30C0.71010.93880.81180.033*
C190.0918 (7)1.0887 (4)0.90822 (13)0.0226 (10)
H19A0.04911.07750.93410.034*
H19B0.01391.07750.89100.034*
H19C0.14211.16930.90530.034*
C200.2217 (7)1.0257 (4)0.69762 (13)0.0202 (10)
C210.1120 (7)1.1431 (5)0.70141 (14)0.0261 (11)
H21A0.20031.20930.70420.039*
H21B0.03081.13930.72350.039*
H21C0.03531.15540.67900.039*
C220.0884 (7)0.9175 (5)0.68812 (14)0.0245 (10)
H22A0.14260.84140.69700.029*
H22B0.03700.92830.69950.029*
C230.0774 (8)0.9211 (4)0.64427 (14)0.0255 (10)
H23A0.04130.84280.63380.031*
H23B0.01200.98240.63550.031*
C240.2804 (7)0.9535 (4)0.63416 (14)0.0257 (11)
H24A0.35880.88000.63620.031*
C250.3219 (8)1.0139 (5)0.59506 (15)0.0294 (11)
C260.5357 (9)1.0307 (6)0.59086 (17)0.0382 (14)
H26A0.56321.06590.56640.057*
H26B0.59810.95330.59290.057*
H26C0.58151.08350.61070.057*
C270.2159 (9)1.1313 (5)0.58997 (15)0.0351 (13)
H27A0.24111.16320.56490.053*
H27B0.25791.18860.60890.053*
H27C0.08111.11730.59280.053*
C280.5949 (8)0.9895 (6)0.98605 (15)0.0344 (12)
H28A0.59011.00981.01270.052*
H28C0.71061.02100.97510.052*
H28D0.59230.90280.98320.052*
C290.4088 (9)1.1798 (5)0.97708 (14)0.0302 (12)
H29C0.39411.18621.00430.045*
H29D0.30031.21590.96470.045*
H29A0.52321.22130.96940.045*
C180.3211 (7)1.2099 (4)0.83435 (14)0.0237 (10)
H18A0.27791.23370.85930.036*
H18B0.21331.20360.81740.036*
H18C0.40871.26960.82470.036*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O310.043 (2)0.049 (2)0.029 (2)0.013 (2)0.0095 (18)0.0026 (18)
O320.0313 (18)0.0309 (19)0.0202 (15)0.0033 (17)0.0022 (14)0.0007 (14)
O330.0307 (18)0.0328 (19)0.0195 (16)0.0063 (15)0.0047 (14)0.0008 (15)
O340.046 (2)0.035 (2)0.0225 (17)0.0042 (19)0.0020 (17)0.0001 (15)
C10.021 (2)0.028 (3)0.022 (2)0.006 (2)0.0023 (19)0.001 (2)
C20.036 (3)0.031 (3)0.025 (2)0.006 (2)0.002 (2)0.006 (2)
C30.034 (3)0.036 (3)0.017 (2)0.002 (2)0.005 (2)0.010 (2)
C40.025 (2)0.027 (2)0.020 (2)0.001 (2)0.003 (2)0.0022 (19)
C50.019 (2)0.022 (2)0.021 (2)0.0041 (19)0.0062 (19)0.0019 (19)
C60.012 (2)0.028 (2)0.021 (2)0.0015 (19)0.0016 (17)0.0021 (19)
C70.016 (2)0.023 (2)0.022 (2)0.0068 (19)0.0033 (18)0.0054 (18)
C80.016 (2)0.022 (2)0.017 (2)0.0077 (19)0.0012 (18)0.0014 (18)
C90.011 (2)0.023 (2)0.0159 (19)0.0030 (18)0.0004 (16)0.0053 (18)
C100.016 (2)0.023 (2)0.019 (2)0.0015 (19)0.0020 (17)0.0020 (18)
C110.013 (2)0.021 (2)0.022 (2)0.0026 (17)0.0007 (17)0.0058 (18)
C120.021 (2)0.023 (2)0.018 (2)0.0068 (19)0.0034 (18)0.0029 (18)
C130.024 (2)0.018 (2)0.019 (2)0.0029 (19)0.0040 (19)0.0013 (17)
C140.016 (2)0.017 (2)0.017 (2)0.0048 (17)0.0023 (17)0.0003 (17)
C150.022 (2)0.026 (2)0.023 (2)0.004 (2)0.002 (2)0.0021 (19)
C160.013 (2)0.028 (2)0.024 (2)0.0043 (19)0.0007 (18)0.000 (2)
C170.019 (2)0.015 (2)0.023 (2)0.0042 (18)0.0006 (18)0.0004 (18)
C300.016 (2)0.026 (2)0.024 (2)0.0000 (19)0.0011 (19)0.0006 (19)
C190.019 (2)0.029 (2)0.020 (2)0.000 (2)0.0014 (18)0.0009 (19)
C200.019 (2)0.021 (2)0.021 (2)0.0000 (19)0.0021 (18)0.0050 (18)
C210.022 (2)0.031 (3)0.025 (2)0.003 (2)0.005 (2)0.004 (2)
C220.023 (2)0.027 (2)0.023 (2)0.001 (2)0.000 (2)0.0035 (19)
C230.028 (3)0.023 (2)0.026 (2)0.007 (2)0.000 (2)0.002 (2)
C240.030 (3)0.024 (2)0.023 (2)0.004 (2)0.000 (2)0.0011 (19)
C250.032 (3)0.031 (3)0.025 (2)0.002 (2)0.000 (2)0.000 (2)
C260.040 (3)0.043 (3)0.032 (3)0.006 (3)0.007 (2)0.007 (3)
C270.040 (3)0.040 (3)0.025 (2)0.003 (3)0.002 (2)0.007 (2)
C280.033 (3)0.045 (3)0.025 (2)0.000 (3)0.013 (2)0.000 (2)
C290.034 (3)0.035 (3)0.021 (2)0.010 (2)0.002 (2)0.006 (2)
C180.023 (2)0.023 (2)0.025 (2)0.002 (2)0.000 (2)0.004 (2)
Geometric parameters (Å, º) top
O31—C31.223 (7)C15—C161.558 (6)
O32—C31.352 (7)C15—H15A0.9700
O32—C41.485 (6)C15—H15B0.9700
O33—C241.433 (6)C16—C171.576 (6)
O33—C201.472 (5)C16—H16A0.9700
O34—C251.428 (6)C16—H16B0.9700
O34—H34A0.8200C17—C201.519 (6)
C1—C21.551 (7)C17—H17A0.9800
C1—C101.576 (7)C30—H30A0.9600
C1—H1A0.9700C30—H30B0.9600
C1—H1B0.9700C30—H30C0.9600
C2—C31.477 (8)C19—H19A0.9600
C2—H2A0.9700C19—H19B0.9600
C2—H2B0.9700C19—H19C0.9600
C4—C281.523 (7)C20—C211.509 (7)
C4—C291.542 (7)C20—C221.548 (7)
C4—C51.569 (6)C21—H21A0.9600
C5—C61.548 (7)C21—H21B0.9600
C5—C101.557 (6)C21—H21C0.9600
C5—H5A0.9800C22—C231.536 (6)
C6—C71.520 (6)C22—H22A0.9700
C6—H6A0.9700C22—H22B0.9700
C6—H6B0.9700C23—C241.505 (7)
C7—C81.535 (6)C23—H23A0.9700
C7—H7A0.9700C23—H23B0.9700
C7—H7B0.9700C24—C251.548 (7)
C8—C181.524 (6)C24—H24A0.9800
C8—C91.562 (6)C25—C271.500 (8)
C8—C141.597 (6)C25—C261.513 (8)
C9—C111.541 (6)C26—H26A0.9600
C9—C101.579 (6)C26—H26B0.9600
C9—H9A0.9800C26—H26C0.9600
C10—C191.518 (6)C27—H27A0.9600
C11—C121.543 (6)C27—H27B0.9600
C11—H11A0.9700C27—H27C0.9600
C11—H11B0.9700C28—H28A0.9600
C12—C131.525 (6)C28—H28C0.9600
C12—H12A0.9700C28—H28D0.9600
C12—H12B0.9700C29—H29C0.9600
C13—C171.533 (6)C29—H29D0.9600
C13—C141.538 (6)C29—H29A0.9600
C13—H13A0.9800C18—H18A0.9600
C14—C151.538 (6)C18—H18B0.9600
C14—C301.540 (6)C18—H18C0.9600
C3—O32—C4124.7 (4)C15—C16—C17106.4 (4)
C24—O33—C20110.9 (4)C15—C16—H16A110.4
C25—O34—H34A109.5C17—C16—H16A110.4
C2—C1—C10117.2 (4)C15—C16—H16B110.4
C2—C1—H1A108.0C17—C16—H16B110.4
C10—C1—H1A108.0H16A—C16—H16B108.6
C2—C1—H1B108.0C20—C17—C13118.6 (4)
C10—C1—H1B108.0C20—C17—C16113.4 (4)
H1A—C1—H1B107.2C13—C17—C16103.0 (4)
C3—C2—C1110.1 (4)C20—C17—H17A107.0
C3—C2—H2A109.6C13—C17—H17A107.0
C1—C2—H2A109.6C16—C17—H17A107.0
C3—C2—H2B109.6C14—C30—H30A109.5
C1—C2—H2B109.6C14—C30—H30B109.5
H2A—C2—H2B108.2H30A—C30—H30B109.5
O31—C3—O32116.8 (5)C14—C30—H30C109.5
O31—C3—C2123.5 (5)H30A—C30—H30C109.5
O32—C3—C2119.6 (4)H30B—C30—H30C109.5
O32—C4—C28106.7 (4)C10—C19—H19A109.5
O32—C4—C2999.5 (4)C10—C19—H19B109.5
C28—C4—C29108.4 (4)H19A—C19—H19B109.5
O32—C4—C5116.3 (4)C10—C19—H19C109.5
C28—C4—C5110.4 (4)H19A—C19—H19C109.5
C29—C4—C5114.7 (4)H19B—C19—H19C109.5
C6—C5—C10111.4 (4)O33—C20—C21106.7 (4)
C6—C5—C4108.3 (4)O33—C20—C17104.8 (4)
C10—C5—C4118.4 (4)C21—C20—C17114.1 (4)
C6—C5—H5A106.0O33—C20—C22103.3 (4)
C10—C5—H5A106.0C21—C20—C22111.9 (4)
C4—C5—H5A106.0C17—C20—C22114.8 (4)
C7—C6—C5112.1 (4)C20—C21—H21A109.5
C7—C6—H6A109.2C20—C21—H21B109.5
C5—C6—H6A109.2H21A—C21—H21B109.5
C7—C6—H6B109.2C20—C21—H21C109.5
C5—C6—H6B109.2H21A—C21—H21C109.5
H6A—C6—H6B107.9H21B—C21—H21C109.5
C6—C7—C8111.6 (4)C23—C22—C20103.0 (4)
C6—C7—H7A109.3C23—C22—H22A111.2
C8—C7—H7A109.3C20—C22—H22A111.2
C6—C7—H7B109.3C23—C22—H22B111.2
C8—C7—H7B109.3C20—C22—H22B111.2
H7A—C7—H7B108.0H22A—C22—H22B109.1
C18—C8—C7109.5 (4)C24—C23—C22101.1 (4)
C18—C8—C9113.2 (4)C24—C23—H23A111.5
C7—C8—C9107.4 (4)C22—C23—H23A111.5
C18—C8—C14109.9 (4)C24—C23—H23B111.5
C7—C8—C14110.5 (4)C22—C23—H23B111.5
C9—C8—C14106.2 (3)H23A—C23—H23B109.4
C11—C9—C8111.1 (4)O33—C24—C23105.4 (4)
C11—C9—C10112.4 (3)O33—C24—C25107.1 (4)
C8—C9—C10117.7 (4)C23—C24—C25119.1 (4)
C11—C9—H9A104.7O33—C24—H24A108.3
C8—C9—H9A104.7C23—C24—H24A108.3
C10—C9—H9A104.7C25—C24—H24A108.3
C19—C10—C5112.6 (4)O34—C25—C27110.0 (4)
C19—C10—C1108.2 (4)O34—C25—C26109.9 (5)
C5—C10—C1109.1 (4)C27—C25—C26111.7 (5)
C19—C10—C9113.8 (4)O34—C25—C24103.6 (4)
C5—C10—C9109.0 (4)C27—C25—C24112.5 (4)
C1—C10—C9103.7 (4)C26—C25—C24108.8 (4)
C9—C11—C12112.8 (4)C25—C26—H26A109.5
C9—C11—H11A109.0C25—C26—H26B109.5
C12—C11—H11A109.0H26A—C26—H26B109.5
C9—C11—H11B109.0C25—C26—H26C109.5
C12—C11—H11B109.0H26A—C26—H26C109.5
H11A—C11—H11B107.8H26B—C26—H26C109.5
C13—C12—C11109.8 (4)C25—C27—H27A109.5
C13—C12—H12A109.7C25—C27—H27B109.5
C11—C12—H12A109.7H27A—C27—H27B109.5
C13—C12—H12B109.7C25—C27—H27C109.5
C11—C12—H12B109.7H27A—C27—H27C109.5
H12A—C12—H12B108.2H27B—C27—H27C109.5
C12—C13—C17119.9 (4)C4—C28—H28A109.5
C12—C13—C14112.1 (4)C4—C28—H28C109.5
C17—C13—C14105.8 (4)H28A—C28—H28C109.5
C12—C13—H13A106.0C4—C28—H28D109.5
C17—C13—H13A106.0H28A—C28—H28D109.5
C14—C13—H13A106.0H28C—C28—H28D109.5
C13—C14—C15100.7 (4)C4—C29—H29C109.5
C13—C14—C30110.4 (4)C4—C29—H29D109.5
C15—C14—C30106.5 (4)H29C—C29—H29D109.5
C13—C14—C8110.6 (4)C4—C29—H29A109.5
C15—C14—C8116.2 (4)H29C—C29—H29A109.5
C30—C14—C8111.9 (4)H29D—C29—H29A109.5
C14—C15—C16104.6 (4)C8—C18—H18A109.5
C14—C15—H15A110.8C8—C18—H18B109.5
C16—C15—H15A110.8H18A—C18—H18B109.5
C14—C15—H15B110.8C8—C18—H18C109.5
C16—C15—H15B110.8H18A—C18—H18C109.5
H15A—C15—H15B108.9H18B—C18—H18C109.5
C10—C1—C2—C363.3 (6)C17—C13—C14—C1544.3 (4)
C4—O32—C3—O31169.9 (4)C12—C13—C14—C3064.5 (5)
C4—O32—C3—C215.1 (7)C17—C13—C14—C3067.9 (5)
C1—C2—C3—O31107.2 (6)C12—C13—C14—C859.9 (5)
C1—C2—C3—O3267.5 (6)C17—C13—C14—C8167.7 (4)
C3—O32—C4—C2876.9 (5)C18—C8—C14—C1363.3 (5)
C3—O32—C4—C29170.5 (4)C7—C8—C14—C13175.7 (4)
C3—O32—C4—C546.8 (6)C9—C8—C14—C1359.5 (5)
O32—C4—C5—C6150.4 (4)C18—C8—C14—C1550.6 (5)
C28—C4—C5—C687.9 (5)C7—C8—C14—C1570.4 (5)
C29—C4—C5—C634.9 (6)C9—C8—C14—C15173.5 (4)
O32—C4—C5—C1022.4 (6)C18—C8—C14—C30173.2 (4)
C28—C4—C5—C10144.1 (4)C7—C8—C14—C3052.2 (5)
C29—C4—C5—C1093.1 (5)C9—C8—C14—C3064.0 (4)
C10—C5—C6—C758.1 (5)C13—C14—C15—C1638.9 (4)
C4—C5—C6—C7170.0 (4)C30—C14—C15—C1676.3 (4)
C5—C6—C7—C862.3 (5)C8—C14—C15—C16158.3 (4)
C6—C7—C8—C1867.2 (5)C14—C15—C16—C1720.4 (5)
C6—C7—C8—C956.1 (5)C12—C13—C17—C2074.5 (6)
C6—C7—C8—C14171.5 (4)C14—C13—C17—C20157.7 (4)
C18—C8—C9—C1162.4 (5)C12—C13—C17—C16159.3 (4)
C7—C8—C9—C11176.6 (3)C14—C13—C17—C1631.5 (4)
C14—C8—C9—C1158.3 (4)C15—C16—C17—C20136.0 (4)
C18—C8—C9—C1069.2 (5)C15—C16—C17—C136.5 (5)
C7—C8—C9—C1051.7 (5)C24—O33—C20—C21113.7 (4)
C14—C8—C9—C10170.0 (4)C24—O33—C20—C17125.0 (4)
C6—C5—C10—C1978.2 (5)C24—O33—C20—C224.4 (5)
C4—C5—C10—C1948.3 (6)C13—C17—C20—O33164.2 (4)
C6—C5—C10—C1161.6 (4)C16—C17—C20—O3343.1 (5)
C4—C5—C10—C171.9 (5)C13—C17—C20—C2147.9 (6)
C6—C5—C10—C949.0 (5)C16—C17—C20—C2173.2 (5)
C4—C5—C10—C9175.6 (4)C13—C17—C20—C2283.2 (5)
C2—C1—C10—C19102.1 (5)C16—C17—C20—C22155.8 (4)
C2—C1—C10—C520.8 (6)O33—C20—C22—C2327.2 (5)
C2—C1—C10—C9136.8 (4)C21—C20—C22—C2387.2 (5)
C11—C9—C10—C1953.3 (5)C17—C20—C22—C23140.7 (4)
C8—C9—C10—C1977.7 (5)C20—C22—C23—C2439.0 (5)
C11—C9—C10—C5179.9 (4)C20—O33—C24—C2320.8 (5)
C8—C9—C10—C548.9 (5)C20—O33—C24—C25148.5 (4)
C11—C9—C10—C164.0 (5)C22—C23—C24—O3337.0 (5)
C8—C9—C10—C1165.0 (4)C22—C23—C24—C25157.1 (4)
C8—C9—C11—C1258.0 (5)O33—C24—C25—O34179.1 (4)
C10—C9—C11—C12167.7 (4)C23—C24—C25—O3459.9 (6)
C9—C11—C12—C1354.2 (5)O33—C24—C25—C2760.4 (6)
C11—C12—C13—C17179.8 (4)C23—C24—C25—C2758.8 (6)
C11—C12—C13—C1455.3 (5)O33—C24—C25—C2664.0 (6)
C12—C13—C14—C15176.7 (4)C23—C24—C25—C26176.8 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C19—H19A···O320.962.443.082 (6)124
O34—H34A···O32i0.822.203.010 (5)170
C26—H26A···O31i0.962.533.392 (7)150
Symmetry code: (i) x+1/2, y+2, z1/2.

Experimental details

Crystal data
Chemical formulaC30H50O4
Mr474.70
Crystal system, space groupOrthorhombic, P212121
Temperature (K)100
a, b, c (Å)6.9881 (1), 11.0108 (2), 34.9733 (7)
V3)2691.01 (8)
Z4
Radiation typeCu Kα
µ (mm1)0.59
Crystal size (mm)0.40 × 0.08 × 0.07
Data collection
DiffractometerBruker APEXII CCD
Absorption correctionMulti-scan
(SADABS; Bruker, 2009)
Tmin, Tmax0.801, 0.960
No. of measured, independent and
observed [I > 2σ(I)] reflections
48305, 5058, 5040
Rint0.045
(sin θ/λ)max1)0.609
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.092, 0.233, 1.21
No. of reflections5058
No. of parameters316
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.47, 0.38
Absolute structureFlack, H. D. (1983). Acta Cryst. A39, 876–881
Absolute structure parameter0.1 (5)

Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), Mercury (Macrae et al., 2006).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C19—H19A···O320.962.443.082 (6)124
O34—H34A···O32i0.822.203.010 (5)170
C26—H26A···O31i0.962.533.392 (7)150
Symmetry code: (i) x+1/2, y+2, z1/2.
 

Acknowledgements

This research work was supported financially by the Research University Grant Scheme (RUGS: 05–01–09–0732RU) of Universiti Putra Malaysia, Malaysia.

References

First citationBernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555-1573.  CrossRef CAS Web of Science Google Scholar
First citationBruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.  Google Scholar
First citationBurkill, L. H. (1966). A Dictionary of Economics Products of The Malay Peninsula, Vols. I and II. Kuala Lumpur: Ministry of Agriculture and Cooperatives.  Google Scholar
First citationFujiwara, T., Takeda, T., Ogihara, Y., Shimizu, M., Nomura, T. & Tomita, Y. (1982). Chem. Pharm. Bull. 30, 4025–4030.  CrossRef CAS PubMed Web of Science Google Scholar
First citationHegnauer, R. (1990). Editor. Chemotaxonomie der Planzen, Vol. IX. Basel and Stuttgart: Birkhauser Verlag.  Google Scholar
First citationMacrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457.  Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
First citationPan, L., Kardono, L. B. S., Riswan, S., Chai, H., Carcache de Blanco, E. J., Pannell, C. M., Soejart, D. D., McCloud, T. G., Newman, D. J. & Kinghorn, A. D. (2010). J. Nat. Prod. 73, 1873–1878.  Web of Science CrossRef CAS PubMed Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar

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