The food metabolome: a window over dietary exposure123
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From the International Agency for Research on Cancer, Lyon, France (AS); University College Dublin, Dublin, Ireland (LB); the Institut National de la Recherche Agronomique, Clermont-Ferrand, France (CM); Clermont University, Clermont-Ferrand, France (CM); the University of Barcelona, Barcelona, Spain (CA-L); the University of Copenhagen, Frederiksberg, Denmark (LOD); Aberystwyth University, Aberystwyth, United Kingdom (JD); the University of California, Berkeley, CA (SMR); the University of Glasgow, Glasgow, United Kingdom (JJJvdH); and the University of Alberta, Edmonton, Canada (DSW).
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Supported by the European Union (NutriTech FP7-KBBE-2011-5 grant 289511, EUROCAN FP7-KBBE-2010.2.4.1-2 grant 260791); the Danish Ministry of Science, Technology, and Innovation (for the UNIK Food, Fitness and Pharma Project); the French National Agency for Research (PhenoMeNEp ANR-10-ALIA-007); the Medical Research Council (MR/J010308/1); and the Spanish Ministerio de Economia y Competitividad (MINECO; project AGL2009-13906-C02-01) and by a Senior Visiting Scientist Award (to SMR) granted by the International Agency for Research on Cancer.
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Address correspondence to A Scalbert, International Agency for Research on Cancer (IARC), Nutrition and Metabolism Section, Biomarkers Group, 150 Cours Albert Thomas, F-69372 Lyon Cedex 08, France. E-mail: [email protected].
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Abbreviations used: dbNP, Nutritional Phenotype Database; ECMDB, E-coli Metabolome Database; FDR, false discovery rate; GC-MS, gas chromatography–mass spectrometry; HMDB, Human Metabolome Database; LC-MS, liquid chromatography–mass spectrometry; MS, mass spectrometry; MSI, Metabolomics Standards Initiative; MWAS, metabolome-wide association study; NMR, nuclear magnetic resonance spectroscopy; PCA, principal components analysis; PLS-DA, partial least-squares discriminant analysis; TMAO, trimethylamine oxide-N-oxide; YMDB, Yeast Metabolome Database.